PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP007710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 134aa MW: 15125.6 Da PI: 4.2825 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 2 | 25 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ ksFs +Lk+H++ + PCP007710.1 2 YSCNRCNkKSFSVVADLKSHLKHC 25 99*******************977 PP | |||||||
2 | zf-C2H2 | 15.1 | 6.5e-05 | 33 | 49 | 5 | 21 |
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg+sFsrks L H+ PCP007710.1 33 TCGTSFSRKSKLFGHMA 49 6**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MYSCNRCNKK SFSVVADLKS HLKHCGEARW RCTCGTSFSR KSKLFGHMAL FEGHMPAVED 60 EKSGGGSKVV TAMEQHDDEE EEEEEEEEGM TTSSKGRELN SSSNIYEDIE FSDELLNGFG 120 SIDDYFLEDM LTDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.3 | 6e-26 | C2H2 family protein |