PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007662.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 334aa    MW: 36060.7 Da    PI: 4.4735
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007662.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.12.2e-36321232102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++liswse+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fkkg+k ll++i+
   PCP007662.1  32 FLTKTYQLVDDPSVDDLISWSEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDFFKKGEKGLLREIQ 119
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
   PCP007662.1 120 RRKI 123
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MSSLPAEQNG DSAPAGSGGG GGDSQRSLPT PFLTKTYQLV DDPSVDDLIS WSEDGSAFIV  60
WRPAEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVVPDRW EFANDFFKKG EKGLLREIQR  120
RKISPSVSAA ATVVPPAMAA ISALAPRVSP SNSGDEQVIS SNSSPVAAPA MLASRIRSST  180
STSDVLEENE RLRKENMHLS HELTQLRGLC NNILALMTNY ASGQLESGGG GGGGGVVDDG  240
RTLELSPVKE AEPAAEDAGC NGANAEASGA EEEEEEEEEE MRPRLFGVSI GVKRVRRDED  300
EEEQHREGSE GAKQEPSDGS LKRDCDATWL ELGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.14e-78HSF family protein