PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007487.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 316aa    MW: 34237.2 Da    PI: 6.8032
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007487.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-30108161155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PCP007487.1 108 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 161
                  59*******************.********************************8 PP
2Myb_DNA-binding48.12.7e-15110160148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
      PCP007487.1 110 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 160
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MREDDESNWF SRWEEELPTP DELMPLSQTL ITPDLALAFD ISHQHPPPPH SQSQPQPQPP  60
HTPPPPPPPP NSLPPATPTH PNSSADFADS ADLGSGAAGD EPARTLKRPR LVWTPQLHKR  120
FVDAVAHLGI KNAVPKTIMQ LMSVDGLTRE NVASHLQKYR LYLKRMQGLS GGSAGAAGAG  180
VAGLAASADP ATDHLFASSP VPAHFLHPHP GGRPNSEHFL PFVPVALQQH HHHQQQQQQI  240
AAAVAAHPHY HRQVGHFGSP PNGQFEHPFL ARQSSQPVHR MGAPLHNSVP GYVEDLESAN  300
ATEGRKVLTL FPTGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.13e-77G2-like family protein