PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP007486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | G2-like | ||||||||
Protein Properties | Length: 316aa MW: 34066 Da PI: 6.8606 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.6 | 1.8e-30 | 108 | 161 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl PCP007486.1 108 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 161 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 110 | 160 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ PCP007486.1 110 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 160 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MREDDESNWF SRWEEELPSP EELMPLSQTL ITPDLALAFD ISHQHPPPPH SQSQPQPQPP 60 HTPPPPPPPP NSLPPATPTH PNSSADFADS ADLGSGAAGD EPARTLKRPR LVWTPQLHKR 120 FVDAVAHLGI KNAVPKTIMQ LMSVDGLTRE NVASHLQKYR LYLKRMQGLS GGSAGGAGGG 180 AAGLAASADP ATDHLFASSP VPAHFLHPHP GGRPNSEHFL PFVPVALQQH HHHQQQQQQI 240 AAAVAAHPQY HRQVGHFGSP PNGQLEHPFL ARQSSQPVHR MGAPLHNSVP GYVEDLESAN 300 ATGGRKVLTL FPTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 8e-72 | G2-like family protein |