PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007387.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 2186aa    MW: 249971 Da    PI: 8.7201
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007387.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73.1e-11431181999
                  -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
           B3  19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                  p + +  +g     + +++l+ ++g++W + l  + ++++++l kGW++F++   L+ g  ++F ++g+ s f  +v++f +
  PCP007387.1  43 PESAVVMYGDY--LGDKVVLKVPNGEKWPIGL--TSRDRKVWLNKGWSKFAEFYSLDHGNLLIFNFEGDhSHF--HVRIFAR 118
                  55666566433..4568***************..999999***************************988888..9999976 PP
2B346.85.3e-15348429484
                  E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
           B3   4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                  + +++++ +++ l lp  fa+eh  +    +++++tl+ ++ rsW+vk+i+   + + ++ +   GWk F+++n+L+egD++vF+ 
  PCP007387.1 348 IRMRPSYISTH-LKLPIYFAQEHicE---SGERKVTLKISDMRSWSVKCIIqlyNCQTCARFRDHGWKAFARDNRLEEGDVCVFEN 429
                  56777888888.9**********653...34468***************9855433333355669*******************93 PP
3B360.72.5e-194765681100
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ffk+  p+d+++   l++p kf++++g++   s  + l+ +sg +We+++  r++ g ++++kGW eF++   L+ gD++vF+++g+s+f  +v +f+
  PCP007387.1 476 FFKII-PNDASRYTKLRIPEKFVNKYGES--ISNPILLKLPSGVEWEIQV--RNCNGDIWFGKGWPEFCEFYSLDYGDSLVFRYEGNSKF--HVCIFD 566
                  66655.99******************866..6667***************..**********************************9999..*****9 PP

                  SS CS
           B3  99 ks 100
                  +s
  PCP007387.1 567 RS 568
                  85 PP
4B348.41.7e-15663743387
                  EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
           B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                  kv +++++  ++ l+lp +fa++h ++++++s   +l  ++g +W+vk++y ++ +r++   GW  Fv +n+L++gD++vF l+++
  PCP007387.1 663 KVAMQPSNVFHK-LILPSEFAKRHlMQQPTGS--AVLCVPDGGTWRVKFTYANQISRFL--CGWLAFVGDNDLRVGDVCVFILIKD 743
                  455555555555.9**********76666665..99999**********9999988865..69******************99876 PP
5B3469.7e-1584992716100
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                   ++pkkf++++g++   s  + ++ +sg +We+++  ++++g++++ kGW +F +   L  gD ++F+++++s+f  +v +f++s
  PCP007387.1 849 QRIPKKFVNNYGEN--LSNPVHFKLPSGAEWEIEV--TRRGGEVWFDKGWPKFSEFYSLGYGDCLIFRYEWNSKF--HVCIFDRS 927
                  48******999966..7778***************..*************************************9..*****985 PP
6B3634.9e-2010251110394
                   EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3    3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94  
                   kv +++++  + rl+lp +fa+++  + +++    +l+ ++gr+W+vk++y++k+ r++l+  W  Fv++n+Lk gD++vF+l++   f+ ++
  PCP007387.1 1025 KVAMQPSYIFN-RLILPSEFAKKYlTQHPTG--SAILRVPDGRTWSVKFKYDNKRARFLLG--WLAFVEDNNLKIGDVCVFMLIKG--FKITF 1110
                   45555555555.5***********7434444..5999********************9886..*******************9974..44433 PP
7B336.39.6e-1212861357478
                   E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
           B3    4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78  
                   v+ ps+v++s  l l  +f+++h +  k  ++  +l+ ++g +W+vkl+ ++++gr+ l+ GW+ Fv +n+L++ D
  PCP007387.1 1286 VMQPSYVTQSY-LHLRSEFINRHlN-MKSAGRNAILQGPNGGTWSVKLKCENSKGRF-LQ-GWQAFVTDNNLEVDD 1357
                   66677777775.***********63.4556789***************989999885.66.************998 PP
8B351.42e-1616351717287
                   EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
           B3    2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87  
                   fkv +++++   + l+lp  fa++h ++++++    +l+ ++g +W vkl+    +g++ +++GW +Fv++n+Lk+gD++vF l++ 
  PCP007387.1 1635 FKVAMQPSYIFGH-LILPAGFAKRHlMHQPHG--NAILRLPDGGTWCVKLKL-YEKGKVRFQRGWLDFVRDNNLKTGDVCVFILIKG 1717
                   4566666666666.9**********8777666..599999**********64.3334688**********************98864 PP
9B3551.5e-1719712058899
                   -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3    8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                   + +  s+ l lp kf+++h  +k++s  ++l+ ++g +W v+++y+ ++    +++GW+ F+++n+Lk+gD +vF+l++r+e ++ v +fr+
  PCP007387.1 1971 PAYIHSSYLGLPSKFVRTHL-NKQRSSNVILQILDGSTWPVNFKYDVTP---RFQNGWSVFARENNLKVGDLCVFELINRNELTFEVVFFRA 2058
                   555667779**********4.4557779***************888888...48************************99999999999986 PP
10B338.71.8e-12210521851698
                   EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   16 lvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                    ++p kfa ++ + k+++   tl+    r W v+li   + ++++++++GW  F ++n L++gD+++F+l+++++  l+v++fr
  PCP007387.1 2105 QYVPVKFAMRFPLRKAQT--ATLQ-VGERFWPVNLIGyINERRQMIISGGWLAFEEENSLRTGDVCTFELVETNDIVLKVHIFR 2185
                   5789****9999998885..5544.477*******76577778899*************************999999*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 2186 aa     Download sequence    
MPMSSPNHNV PSLIYVTCSL DIVDNYRCMD ILIRASYPLQ KLPESAVVMY GDYLGDKVVL  60
KVPNGEKWPI GLTSRDRKVW LNKGWSKFAE FYSLDHGNLL IFNFEGDHSH FHVRIFARSC  120
LEKDFGSFFS VEDHLSGETD NVGSSESPLM GSCSKRNGEG PAFPLNAPPS FFKVVLDDTL  180
RDGKIKIPPI GSMKYEDFIG DKMFLEVPNG PVWPVELSRR DCEIWLRKGW LKFAQFYFLE  240
LGCLLLFTYK GVYSHFQVRI FRRNTLEMDY FNLSDEDETD SNSSGEIECQ RMKHDKERRT  300
HGGDGGMAAA HRSPKVLLRT GQSELEDKTE RAFAKAKSFK PRNPFAVIRM RPSYISTHLK  360
LPIYFAQEHI CESGERKVTL KISDMRSWSV KCIIQLYNCQ TCARFRDHGW KAFARDNRLE  420
EGDVCVFENN SAMCPAAAIT LLFVDFSATL ELRAMASLLP ETDRARPTFS ATTPHFFKII  480
PNDASRYTKL RIPEKFVNKY GESISNPILL KLPSGVEWEI QVRNCNGDIW FGKGWPEFCE  540
FYSLDYGDSL VFRYEGNSKF HVCIFDRSAT EIEYPLPFPE VEETDEDDDE SVEVLEDFPP  600
CPRTRQKSPL PCPLPRMKKR ISTSSGKKFG NKSSSRRHPL TKNEKSIALQ RCIDFKSEKP  660
HFKVAMQPSN VFHKLILPSE FAKRHLMQQP TGSAVLCVPD GGTWRVKFTY ANQISRFLCG  720
WLAFVGDNDL RVGDVCVFIL IKDIPLSFEV VFYRGKCKMG KINGRHVSQR PCTSSLSASE  780
VANKSKISDQ VTQRPSCLKA SRVLEAANKF IPKNPFFRAT VRSPSKPMYV PAEFAKRLKL  840
QKKQIAALQR IPKKFVNNYG ENLSNPVHFK LPSGAEWEIE VTRRGGEVWF DKGWPKFSEF  900
YSLGYGDCLI FRYEWNSKFH VCIFDRSATE IEYPLPLPGM EETDEDDDES VEILEDFPPC  960
PKTRQKSPLP SPLPRKRKRI STSIGSTSKK LETRSTLWMK PLTENEKAIA LQRAIDFKSE  1020
NPHFKVAMQP SYIFNRLILP SEFAKKYLTQ HPTGSAILRV PDGRTWSVKF KYDNKRARFL  1080
LGWLAFVEDN NLKIGDVCVF MLIKGFKITF EVAFYRSKEA AICSISSAAK ECSGGLRTAQ  1140
RDQEPFTISE RSRAYKSYTS LDEPDYEGED EDSVGISDFQ RCTRKTTEKS PLPSPQPLKK  1200
IRTSNKAAKK RNINFRPTKI EPRSKSAVKR EDESDDDSVV SLDKSASCPK NIEKSLLAST  1260
TSGKAIALER AIAFCSKSVN PSFWIVMQPS YVTQSYLHLR SEFINRHLNM KSAGRNAILQ  1320
GPNGGTWSVK LKCENSKGRF LQGWQAFVTD NNLEVDDRIP TSFSKNFIEK KKQIVKLWVD  1380
DRMWHVSLTV HWRKALKLSA GWAAFAKGNW FCFVGFHCSL LEPFVDALVD LMGSCLILVQ  1440
SSFHLARISA WLDEVATKIS LVDLQEIEVP PTKVPMKFVM KYGEELSSPV YLRLPCGSEW  1500
EIELRRCNGE VWFEKGWPEF SKFYSLDYAF WLVFGYEGNS RFHVFIFDRS CTEVDYPIKL  1560
PEKEKTDDED DESVEILDDF PTSRRRKGEK HLSLPCPLPP KKKRRSYSRM HPLTDKDKAI  1620
ALQRAIDFES EKPHFKVAMQ PSYIFGHLIL PAGFAKRHLM HQPHGNAILR LPDGGTWCVK  1680
LKLYEKGKVR FQRGWLDFVR DNNLKTGDVC VFILIKGIEL AFEVVFYRGG HAKGARATDR  1740
GKWEIGTSSS HNPYAGQDCS GGLNLETGYE DHDDKSVEIL DDLCPRKSRD KSQVMRKLEE  1800
TDKHDDDSND DISRDSDEVQ SDPTIPDEEE TDYEDDESVE ILDDLSPCPR KTREKSPLPC  1860
LRRHKKMRTC SSGKAAECNT TFTATKTQPY EIKKSFRSKD SHCSKSEVKR EHDFPTMKEV  1920
GGLSSSPIFR KRTPDVLGRE HALTKSEKAL ALQRANAFKS AHPSFPVAIQ PAYIHSSYLG  1980
LPSKFVRTHL NKQRSSNVIL QILDGSTWPV NFKYDVTPRF QNGWSVFARE NNLKVGDLCV  2040
FELINRNELT FEVVFFRATE AKKCFSSADH GGGAIDQVEI KRRSRCKVKS GCENGEYTKL  2100
KISDQYVPVK FAMRFPLRKA QTATLQVGER FWPVNLIGYI NERRQMIISG GWLAFEEENS  2160
LRTGDVCTFE LVETNDIVLK VHIFRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
115841605RRRKGEKHLSLPCPLPPKKKRR
215851606RRRKGEKHLSLPCPLPPKKKRR
316011605KKKRR
417851791PRKSRDK
518491855PRKSRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-30B3 family protein