PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP007371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 29001.2 Da PI: 6.2885 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ ++ g+ R++k+c++rw +yl PCP007371.1 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWMNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 58.1 | 2e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+e +v+++++lG++ W++Ia+ ++ gRt++++k++w++ PCP007371.1 67 RGNYSKEEEETIVKLHEKLGNR-WSAIAAQLP-GRTDNEIKNHWHTN 111 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MVRTPCRDEN GMKKGTWTPE EDRKLIAYVT RYGCWNWRQL PKFAGLSRCG KSCRLRWMNY 60 LRPNIKRGNY SKEEEETIVK LHEKLGNRWS AIAAQLPGRT DNEIKNHWHT NLKKRTNKKQ 120 CNSSFSSSAT NTEETPSSSN LEAAVDQPIK KAIFPNAEST TALQVTQKSD DRVDNSSQLS 180 SSPQPSSSEV SSMSADDNWV NFVEDFNLSS MEAYADNQFI DDFWTEPFLA DNSYIPSGFY 240 TPLMDSEFLY PLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 8e-61 | MYB family protein |