PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007216.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 357aa    MW: 38699.8 Da    PI: 8.7034
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007216.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.65.8e-3875135262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprC+stntkfCy+nny+lsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  PCP007216.1  75 PETALKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 135
                  67899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MVFSSVPVYL DPPNWQQQQT NHHQQGGGSD QNNPQLPLVP SSEARCTSVD GGGGLGSIKP  60
GSMCDRARMA KMPQPETALK CPRCESTNTK FCYFNNYNLS QPRHFCKTCR RYWTRGGALR  120
SVPVGGGCRR NKRSKGGNSS RSKSPGAAGN SSSSTVNSSN SCSASDNIIG HLTHPPPPHQ  180
LPFLPSLHHL PDYGSGDMLG LNNFGINQPG DVEFQHHQYG SDRFSARPNI LGMNNMSNTE  240
HWRSSLLQQQ FPNFLVNLGQ PTSTTHGLYQ FDGGDHQNVG QLPISKPLDH SAGNGVTITQ  300
MANVKMEQNQ ALNLSRNFLG SLGNDHQYWG SCTTGTGGNA WTDLSGFTTS SSTSHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.13e-40Dof family protein