PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007160.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 351aa    MW: 38534.5 Da    PI: 6.6464
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007160.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY109.31.9e-34173230259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp++v++tYeg+H+h+
  PCP007160.1 173 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFDDPSIVVTTYEGQHTHP 230
                  8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDVKKDVGKR EDNNMNGGGG CGFSTSPFAG MFDFCEGEKS SSLGFMELLG VGVGQDYCPT  60
SLFDYLPQTP STVLPSLVST MGGKDQLSAD YSSLNQQPAT PNSSSISSES SEAVNEEHTD  120
HKAAADQEEN NEEEEHDEQK KTKKELKGKK ASQKRQREPR FAFMTKSEVD HLEDGYRWRK  180
YGQKAVKNSP FPRSYYRCTS ASCNVKKRVE RSFDDPSIVV TTYEGQHTHP SPLLPRPTRT  240
SASASSVASA SPFAPNNFAM SLIPTRTLFP HHYQQVEPFA DNSSPPSSAP FNFGNYHANG  300
SSSSLTNATS TTTRLVHPER RFCSPATGSA LLADHGLLQD IVPSHMLKQE Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.14e-57WRKY family protein