PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007086.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 361aa MW: 39271.5 Da PI: 4.9636

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007086.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	43	88	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l ++v +G ++W++Iar + gR++k+c++rw + PCP007086.1 43 KGPWSPDEDAVLTRLVSNFGARNWSLIARGID-GRSGKSCRLRWCNQ 88 79****************************.*********985 PP
2	Myb_DNA-binding	56.7	5.7e-18	95	139	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +v a++ +G++ W++Iar ++ gRt++ +k++w++ PCP007086.1 95 RKPFTDEEDRMIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 139 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
METEVADDPA AVDIDAGYGG GDSGEEAVAG GGSRRKSGRD NVKGPWSPDE DAVLTRLVSN 60 FGARNWSLIA RGIDGRSGKS CRLRWCNQLD PAVKRKPFTD EEDRMIVAAH AIHGNKWAAI 120 ARLLPGRTDN AIKNHWNSTL KRRCMDPDKL KLESGNMVED VSFDKTKGSS EETFSYGDVN 180 SSKSMEGREV SSLEHMDDQD EYNGSSEVQF SHEATEQPTL FRPMARISAF SVYNQSNSQE 240 PASSFPWPIP VQGPLVQASK LDVGINKFLE GVYGERSVPD QCGHGCCRAQ SGMNFQNSLL 300 GPELVEFSEP PLFPSFELAA IAADISNLAW LKSGLENNSV RAVGETAGRI TTHGSRPNGA 360 F

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

METEVADDPA AVDIDAGYGG GDSGEEAVAG GGSRRKSGRD NVKGPWSPDE DAVLTRLVSN  60
FGARNWSLIA RGIDGRSGKS CRLRWCNQLD PAVKRKPFTD EEDRMIVAAH AIHGNKWAAI  120
ARLLPGRTDN AIKNHWNSTL KRRCMDPDKL KLESGNMVED VSFDKTKGSS EETFSYGDVN  180
SSKSMEGREV SSLEHMDDQD EYNGSSEVQF SHEATEQPTL FRPMARISAF SVYNQSNSQE  240
PASSFPWPIP VQGPLVQASK LDVGINKFLE GVYGERSVPD QCGHGCCRAQ SGMNFQNSLL  300
GPELVEFSEP PLFPSFELAA IAADISNLAW LKSGLENNSV RAVGETAGRI TTHGSRPNGA  360
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-101	MYB family protein