PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006911.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 847aa MW: 98468.1 Da PI: 8.6422

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006911.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.7	5.4e-25	73	181	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkekdgkwevt 79 +fY+eYAk+vGF ++++s++s+ +g++++++f C+++g+++e++++ +++ r++r+ ++t+Cka+++vk++ dg+w + PCP006911.1 73 SFYREYAKSVGFAAVIKASRRSRVSGKFIDAKFACTRHGSKRESNTAeapeyvsnpressicdsvkRKRGRSNRSWEKTDCKASMHVKRQ-DGRWIIR 169 5**************************************9999989***********998889999*************9.*** PP FAR1 80 kleleHnHelap 91 ++ +eHnHe++p PCP006911.1 170 SFIKEHNHEIFP 181 *******975 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MGIDLERPSG ECRKEGIRDH AIVKATNGPA NDEEDTGQNE NKVVARDEIN LNSTKDLEPH 60 DGMEFESKED AFSFYREYAK SVGFAAVIKA SRRSRVSGKF IDAKFACTRH GSKRESNTAE 120 APEYVSNPRE SSICDSVKRK RGRSNRSWEK TDCKASMHVK RQDGRWIIRS FIKEHNHEIF 180 PDEAYYFRGH RDLDLGRYDV DRLLAIRRRT KKMYVDMAKQ SGGFKKLDNQ KGGGTNQSLS 240 RKHLSLEEGD AQVMLDYFLY MQDENPNFFY AVDLNEEQRL KNVFWVDAKG RLDYWNFSDV 300 VFLDTAYIKN EYKLPFVPFI GVNHHFQFIL LGCALLADES KSSYIWLIRA WQKAMGGRAP 360 RVILSSRDKV LKEVITEVLP DSRHCFCLWH IFGKIPDKLG YVIRQHEKFM VKFNKCVFKS 420 WTNEQFEKRW WKMVDRFNLR DDAWFQSLYE DRGRWIPTYM RDTFLAGMST TQRLEGINCF 480 FDKFMQRKTP LKEFLEQYKT ILRERYEEEV KADFETWHKQ PALRSPSPYG KQMATMYTHA 540 VFKKFQVEVL GVVACHPKKE TEDGVIKTFR VQDFVESQDF IVEWNEMTLD VSCLCRSFEF 600 KGFLCRHVLI VLQMSGVHSI PSQYILKRWT KDAKNRQTMR EGSDAAETRV QRYNDLCRRG 660 FKLSDEGSLS QESYSIAFNA LEEALRSCES INNSIQNVTE PISPKTHGPQ GSEGENQGNN 720 NIETNKKNWC IQERTGAFGA RGHNHWNARK LATSELTSRA PNFDGYYGSQ QIVQGMGQLN 780 TIPSSREEYH SNQLMPRLAQ LHFRPQSIPS YFDIQDGLQD VDQSTVGTNQ PHGLSSKHLH 840 SKHPSHQ

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MGIDLERPSG ECRKEGIRDH AIVKATNGPA NDEEDTGQNE NKVVARDEIN LNSTKDLEPH  60
DGMEFESKED AFSFYREYAK SVGFAAVIKA SRRSRVSGKF IDAKFACTRH GSKRESNTAE  120
APEYVSNPRE SSICDSVKRK RGRSNRSWEK TDCKASMHVK RQDGRWIIRS FIKEHNHEIF  180
PDEAYYFRGH RDLDLGRYDV DRLLAIRRRT KKMYVDMAKQ SGGFKKLDNQ KGGGTNQSLS  240
RKHLSLEEGD AQVMLDYFLY MQDENPNFFY AVDLNEEQRL KNVFWVDAKG RLDYWNFSDV  300
VFLDTAYIKN EYKLPFVPFI GVNHHFQFIL LGCALLADES KSSYIWLIRA WQKAMGGRAP  360
RVILSSRDKV LKEVITEVLP DSRHCFCLWH IFGKIPDKLG YVIRQHEKFM VKFNKCVFKS  420
WTNEQFEKRW WKMVDRFNLR DDAWFQSLYE DRGRWIPTYM RDTFLAGMST TQRLEGINCF  480
FDKFMQRKTP LKEFLEQYKT ILRERYEEEV KADFETWHKQ PALRSPSPYG KQMATMYTHA  540
VFKKFQVEVL GVVACHPKKE TEDGVIKTFR VQDFVESQDF IVEWNEMTLD VSCLCRSFEF  600
KGFLCRHVLI VLQMSGVHSI PSQYILKRWT KDAKNRQTMR EGSDAAETRV QRYNDLCRRG  660
FKLSDEGSLS QESYSIAFNA LEEALRSCES INNSIQNVTE PISPKTHGPQ GSEGENQGNN  720
NIETNKKNWC IQERTGAFGA RGHNHWNARK LATSELTSRA PNFDGYYGSQ QIVQGMGQLN  780
TIPSSREEYH SNQLMPRLAQ LHFRPQSIPS YFDIQDGLQD VDQSTVGTNQ PHGLSSKHLH  840
SKHPSHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein