PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 258aa MW: 29497.6 Da PI: 4.6682 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.9 | 1.1e-18 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++q+G g+W++ ++ g+ R++k+c++rw +yl PCP006742.1 5 KGPWTAEEDQILVTYIQQHGHGNWRALPKLAGLLRCGKSCRLRWTNYL 52 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.8e-16 | 58 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++ +++++++lG++ W+ Ia++++ gRt++++k+ w+++l PCP006742.1 58 RGNFSREEEDAIINLHQMLGNR-WSQIAARLP-GRTDNEIKNVWHTHL 103 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MGLKKGPWTA EEDQILVTYI QQHGHGNWRA LPKLAGLLRC GKSCRLRWTN YLRPDIKRGN 60 FSREEEDAII NLHQMLGNRW SQIAARLPGR TDNEIKNVWH THLKKRLKSN QTESDSRAHF 120 YPRKTEQELE PIDDSSHCAK SDSLDCVPVS PARCTSSNTS FVTTNEDNNN NISNNVCVTF 180 DDYQANLPEP DDSFWSEVLP TEYYEETVNE FQAFGGDPQV NMGPTDGGFS LDMYNDNNMD 240 FWFNIFSGAE EIPELLGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 109 | LKKRLKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-70 | MYB family protein |