PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006717.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 1373aa MW: 154160 Da PI: 7.1341

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006717.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.3	3.3e-28	258	317	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg++ pr+YYrC a +Cpv+k+v+r aed +++++tYeg+Hnh+ PCP006717.1 258 MNDGCQWRKYGQKIAKGNPWPRAYYRCNIApSCPVRKQVQRFAEDMSILITTYEGTHNHP 317 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1373 aa Download sequence
MEAASGKSNS RGGSEMEEKR VVLESISSAD DQEAGYKEDI MSTTSNIKGS SAEPDHSVAS 60 TSSSLKEQDY QLESARAEIG KVREENQRLK KYLDRITEDY QTLQMQFYDI QQKANKSKDI 120 AIPSTIKKYN QDEESELVSL SLGSFSGKPK WNQKNDKNPS TSQGKVENES DGESLSLGLD 180 CKYEAAKSSA TTDQVPLANP SPGSSLEEVP KEEARKTWPP KKVLKTMRSS AIEDEVAQQS 240 PAKKARVSVR ARCDTPTMND GCQWRKYGQK IAKGNPWPRA YYRCNIAPSC PVRKQVQRFA 300 EDMSILITTY EGTHNHPLPM SATAMASTTS AAASMLLSGS SSSISGRLNP STIAAHDLHG 360 YNFYLSDNSK SRFYKPNSSL SSSLPTITLD LTSNPSSTSN SLSHFNKFSS SSSSSRQLYP 420 STSLNFGSNS ESNTNMSWRT HLPELPPDNI SNKNQIAPLS SLGIRQQPLQ NSMYQNCMQK 480 NINPNPNPPQ GVPHQFQPDS IAAATEEITA DPSFQSALAT ALTSIIGNNS TATLSPFLQS 540 QIRNKQYCDR LHYGECWLKA NVKCHKYDKL GHIARVCNLN KNVQQGSFAN KVEEPRNLFL 600 VKQTTEVKTV SDIWYIDSRC SNHITSREDL LVNIDRSIKA KVQVGTWVLV DVKGKGTLVN 660 DTEKGKKYIK EVMLIPGLAE NLLSVGQMTK HGYFLVFGDY KVDIFDNKTL TNLVVSVKKK 720 WNMCFPLVFK SNDQLVLKAN VQRCATMWHR RFGHLNYRSL KQLQEHDMVL GLPIMHDSEG 780 NLRHKLEETS VIGIFIGYGT SKAEYISASE ETTQATWLRF VLEDFGEVQS VATPMNCDNT 840 SAIAITKNPI FHQKTKHINR RSLRARTNAP LTRMQGGSNL AMSTPARKRL MRDFKRLQQD 900 PPAGISGAPH DNNIMLWNAV IFGPDDTPWD GGTFKLTLQF TEDYPNKPPT VRFVSRMFHP 960 NIYADGSICL DILQNQWSPI YDVAAILTSI QSLLCDPNPN SPANSEAARM FSENKREYNR 1020 RKSNPNIRSL PNMLVDLAHN PLPLDFPWLM LPDHHRHHHH DVHDGAEAYE NQNLKCFFSL 1080 YTHQTHCLEL PEAFEKTVCG SSSGWLILRD ETTSLVTLLN PLNRAQIALP QLSSSPFYDQ 1140 DPSRVLHKAV LSSDPSRDPF DYKVLAIFGE KRRLICYKAR DKTWTVLQDA GNNYEDIILF 1200 NGEELLATTE IGKLVSCNLD DDGCFSPSVD EIAPPFTFKG GKVYLVGIGG ELMMLIRFVQ 1260 DNPRYGHETY DFEAYRYDQF DSEWEPINVL GEWTIFVGHN HTTAIKAQDF KGLIKPNCIY 1320 FTDDSLDMED SLMVGHDSGV FSMEDRKIEP LGCELSGFMY VWPRPVWFMP SMA

Sequence ? help Back to Top

Protein Sequence Length: 1373 aa Download sequence

MEAASGKSNS RGGSEMEEKR VVLESISSAD DQEAGYKEDI MSTTSNIKGS SAEPDHSVAS  60
TSSSLKEQDY QLESARAEIG KVREENQRLK KYLDRITEDY QTLQMQFYDI QQKANKSKDI  120
AIPSTIKKYN QDEESELVSL SLGSFSGKPK WNQKNDKNPS TSQGKVENES DGESLSLGLD  180
CKYEAAKSSA TTDQVPLANP SPGSSLEEVP KEEARKTWPP KKVLKTMRSS AIEDEVAQQS  240
PAKKARVSVR ARCDTPTMND GCQWRKYGQK IAKGNPWPRA YYRCNIAPSC PVRKQVQRFA  300
EDMSILITTY EGTHNHPLPM SATAMASTTS AAASMLLSGS SSSISGRLNP STIAAHDLHG  360
YNFYLSDNSK SRFYKPNSSL SSSLPTITLD LTSNPSSTSN SLSHFNKFSS SSSSSRQLYP  420
STSLNFGSNS ESNTNMSWRT HLPELPPDNI SNKNQIAPLS SLGIRQQPLQ NSMYQNCMQK  480
NINPNPNPPQ GVPHQFQPDS IAAATEEITA DPSFQSALAT ALTSIIGNNS TATLSPFLQS  540
QIRNKQYCDR LHYGECWLKA NVKCHKYDKL GHIARVCNLN KNVQQGSFAN KVEEPRNLFL  600
VKQTTEVKTV SDIWYIDSRC SNHITSREDL LVNIDRSIKA KVQVGTWVLV DVKGKGTLVN  660
DTEKGKKYIK EVMLIPGLAE NLLSVGQMTK HGYFLVFGDY KVDIFDNKTL TNLVVSVKKK  720
WNMCFPLVFK SNDQLVLKAN VQRCATMWHR RFGHLNYRSL KQLQEHDMVL GLPIMHDSEG  780
NLRHKLEETS VIGIFIGYGT SKAEYISASE ETTQATWLRF VLEDFGEVQS VATPMNCDNT  840
SAIAITKNPI FHQKTKHINR RSLRARTNAP LTRMQGGSNL AMSTPARKRL MRDFKRLQQD  900
PPAGISGAPH DNNIMLWNAV IFGPDDTPWD GGTFKLTLQF TEDYPNKPPT VRFVSRMFHP  960
NIYADGSICL DILQNQWSPI YDVAAILTSI QSLLCDPNPN SPANSEAARM FSENKREYNR  1020
RKSNPNIRSL PNMLVDLAHN PLPLDFPWLM LPDHHRHHHH DVHDGAEAYE NQNLKCFFSL  1080
YTHQTHCLEL PEAFEKTVCG SSSGWLILRD ETTSLVTLLN PLNRAQIALP QLSSSPFYDQ  1140
DPSRVLHKAV LSSDPSRDPF DYKVLAIFGE KRRLICYKAR DKTWTVLQDA GNNYEDIILF  1200
NGEELLATTE IGKLVSCNLD DDGCFSPSVD EIAPPFTFKG GKVYLVGIGG ELMMLIRFVQ  1260
DNPRYGHETY DFEAYRYDQF DSEWEPINVL GEWTIFVGHN HTTAIKAQDF KGLIKPNCIY  1320
FTDDSLDMED SLMVGHDSGV FSMEDRKIEP LGCELSGFMY VWPRPVWFMP SMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-58	WRKY family protein