PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26068.2 Da PI: 7.6181 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 6.9e-16 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++++G+g W+++ + g++R++k+c++rw +yl PCP006658.1 10 KGLWTVEEDRILMDYIREHGKGKWNRVNKVTGLRRCGKSCRLRWMNYL 57 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 60.1 | 4.9e-19 | 63 | 108 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l PCP006658.1 63 RGDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 108 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MESGGNEYKK GLWTVEEDRI LMDYIREHGK GKWNRVNKVT GLRRCGKSCR LRWMNYLSPN 60 VKRGDFSEEE DDLIIRLHNL LGNRWSLIAG RVPGRTDNQV KNHWNTHLSK KLGVSSKKGR 120 TKVKTYPDTE RAKKNSFTPS SNSNSELQPL PNSDSNSNIF GDDEVAAVIN GFDDEIINVK 180 DNNIGFKSGV GFNDMWEAMM ISNDLNLYGS YLLDPTLDDH YAFQFDNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 6e-65 | MYB family protein |