PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006612.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 993aa MW: 109731 Da PI: 6.7205

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006612.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.3	6e-18	414	513	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l + PCP006612.1 414 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLIM 509 89************************555567778***********99899999999.*******************876.7777777 PP EEE- CS B3 95 kvfr 98 ++++ PCP006612.1 510 GFRK 513 7766 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MHTSPLLPNQ QPPIQLSARR YPISTPSPQP LRRFLPDKIA DPTPIPPPPK NQSGSGLAAA 60 AAFHSYLLKW SSSDSVQLKV ASLRLISSLL WFSVSRNFTE FECGNGAADL HERSLRDLDV 120 DRVEERSVYE QSIYCDVYHS EESGWRECGV CGKRLHCGCI ASTLLLDLLD GGGVKCIKCA 180 KDSGPHPISS DEKPDGLGTS KISEPQSNIT DNQLDGRDVE KLKLVQLGNN KDSNGLMNLL 240 QLRNDNTNGL MLKLKHDDVP PPGGEIGGAC FSNFNQAPHG SSEASKAEVF KANLGINNLY 300 ESLPHTNLSM TLGSPLGKAY PFPGAIVDER EHSKTPSPLP LGARPQHLFP KPPKLALSTG 360 LEEKSTMVSH VRVARPPAEG RGRNQLLPRY WPRITDQELQ QISGDSNSTI VPLFEKMLSA 420 SDAGRIGRLV LPKACAEAYF PPISQPEGLP LRIQDVKGKE WMFQFRFWPN NNSRMYVLEG 480 VTPCIQSMQL QAGDTVTFSR MDPEGKLIMG FRKASNTVAM QDSHLTAIQN GPHSSETLFS 540 GVFENLPVIS GYPGLLQSFK GSMDPHLNAL SKHLTTSSGD ISWNKTEKQE GRTREGLQLP 600 SLVPERKRTR NIGSKSKRLL IDSQDALELK LTWEEAQDLL RPPPASKPST VVIEDLEFEE 660 YEEPPVFGKR SIFTVRSTGE QEQWVQCDSC SKWRRLPADA LLSSKWICAD NAWDRSRSSC 720 SMPDELSPRE LENFLRMSKE LKKRRIAADP RPTPEHEASG LDALANAAIL GDSVADPEAA 780 LVATTTKHPR HRPGCSCIVC IQPPSGKGKH KPTCTCNVCM TVKRRFKTMM INKKKRQSER 840 EAEIACRSQH TWAPRDEAEV DSTSRFVSSH VDPSDNEARS ANESESKSQS KLAETGKGIL 900 DLNSHPGREG DLQAGPDHVS MMSLVQVATL PLETYLKHNG ITSLISEQQE SSTSHVPPQV 960 ANETDEQLDE NHCLERESGV EERPDQSQDD PLR

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MHTSPLLPNQ QPPIQLSARR YPISTPSPQP LRRFLPDKIA DPTPIPPPPK NQSGSGLAAA  60
AAFHSYLLKW SSSDSVQLKV ASLRLISSLL WFSVSRNFTE FECGNGAADL HERSLRDLDV  120
DRVEERSVYE QSIYCDVYHS EESGWRECGV CGKRLHCGCI ASTLLLDLLD GGGVKCIKCA  180
KDSGPHPISS DEKPDGLGTS KISEPQSNIT DNQLDGRDVE KLKLVQLGNN KDSNGLMNLL  240
QLRNDNTNGL MLKLKHDDVP PPGGEIGGAC FSNFNQAPHG SSEASKAEVF KANLGINNLY  300
ESLPHTNLSM TLGSPLGKAY PFPGAIVDER EHSKTPSPLP LGARPQHLFP KPPKLALSTG  360
LEEKSTMVSH VRVARPPAEG RGRNQLLPRY WPRITDQELQ QISGDSNSTI VPLFEKMLSA  420
SDAGRIGRLV LPKACAEAYF PPISQPEGLP LRIQDVKGKE WMFQFRFWPN NNSRMYVLEG  480
VTPCIQSMQL QAGDTVTFSR MDPEGKLIMG FRKASNTVAM QDSHLTAIQN GPHSSETLFS  540
GVFENLPVIS GYPGLLQSFK GSMDPHLNAL SKHLTTSSGD ISWNKTEKQE GRTREGLQLP  600
SLVPERKRTR NIGSKSKRLL IDSQDALELK LTWEEAQDLL RPPPASKPST VVIEDLEFEE  660
YEEPPVFGKR SIFTVRSTGE QEQWVQCDSC SKWRRLPADA LLSSKWICAD NAWDRSRSSC  720
SMPDELSPRE LENFLRMSKE LKKRRIAADP RPTPEHEASG LDALANAAIL GDSVADPEAA  780
LVATTTKHPR HRPGCSCIVC IQPPSGKGKH KPTCTCNVCM TVKRRFKTMM INKKKRQSER  840
EAEIACRSQH TWAPRDEAEV DSTSRFVSSH VDPSDNEARS ANESESKSQS KLAETGKGIL  900
DLNSHPGREG DLQAGPDHVS MMSLVQVATL PLETYLKHNG ITSLISEQQE SSTSHVPPQV  960
ANETDEQLDE NHCLERESGV EERPDQSQDD PLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein