PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006604.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 782aa MW: 88735.8 Da PI: 7.0016

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006604.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.7	2e-22	147	204	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK +++++++r+Y+rCt++ +C+++k+v++ ++ p ++ +tY g+H+++ PCP006604.1 147 DGHAWRKYGQKFIRNAKHSRNYFRCTHKlECKATKHVQQIQDHPPLFRTTYFGNHTCK 204 9*******************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MAELIQGREL ASQLSRIFEN RSFIVDGAEG GSAEGIVNKI LWSFVNSLLI INGKESDQEF 60 VSDQIQGNSS GGGGVSDGGS GGGAGADSSS WDANHDHAAP AITSEGYTEE QISCKSTSTF 120 KDRRGSYKRR KTLQNSWTRD TPALTYDGHA WRKYGQKFIR NAKHSRNYFR CTHKLECKAT 180 KHVQQIQDHP PLFRTTYFGN HTCKDYLNAS ELVLNSASPR DSSKFICFDN ANCLTNKQEH 240 HFFSSFTSSL FKKEAFVKED MPTTDHMVKS DHNHSSPCDH LVSNDLTAFE SSGLMSEFSS 300 SIDHEGSVIE GKDEQPLKAS TTMENDEKEE IQTDAGTKMQ IQRGAGAGVS GLMHTTTRDD 360 GLRKRVKLQV QWCRYEIVST GCGVAKWCGD EVRIKAAANQ RTWVVVALQA NRAGRLSLWW 420 DDYVQVEVKD CSKHYIDTNC CLVESHQTFR FTGVYGKSYW AEKEDFWRGF DHCPVLVRWS 480 NAKFKHRGRQ IVEMMDHLGC LQRKWRGNQQ EIDQVSKKVD QLWSQEDRYW QQRSRVQWLQ 540 EGDANMKFFH QFTLQRRRRN KVVSLKNNDG DWVDNPHQVR RLVDEHFMNL FTSLGTMKWG 600 EVLGCLTPKV SAEMNAALGG PVSVDDVNNA AMQMGGLKAS GPDGFPRIFY QAHWDTLAMD 660 VNDIIREMLL GTMDPRQINA IHLAWSSILV GRDILKWGAH WQIMDGNCVR VWIDKWLPTI 720 PVGRPSTLGT VQVSSNFIVG SLIDLENREW NIDFLKPFLV MEELDAILET QIGDPTLRDR 780 LV

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MAELIQGREL ASQLSRIFEN RSFIVDGAEG GSAEGIVNKI LWSFVNSLLI INGKESDQEF  60
VSDQIQGNSS GGGGVSDGGS GGGAGADSSS WDANHDHAAP AITSEGYTEE QISCKSTSTF  120
KDRRGSYKRR KTLQNSWTRD TPALTYDGHA WRKYGQKFIR NAKHSRNYFR CTHKLECKAT  180
KHVQQIQDHP PLFRTTYFGN HTCKDYLNAS ELVLNSASPR DSSKFICFDN ANCLTNKQEH  240
HFFSSFTSSL FKKEAFVKED MPTTDHMVKS DHNHSSPCDH LVSNDLTAFE SSGLMSEFSS  300
SIDHEGSVIE GKDEQPLKAS TTMENDEKEE IQTDAGTKMQ IQRGAGAGVS GLMHTTTRDD  360
GLRKRVKLQV QWCRYEIVST GCGVAKWCGD EVRIKAAANQ RTWVVVALQA NRAGRLSLWW  420
DDYVQVEVKD CSKHYIDTNC CLVESHQTFR FTGVYGKSYW AEKEDFWRGF DHCPVLVRWS  480
NAKFKHRGRQ IVEMMDHLGC LQRKWRGNQQ EIDQVSKKVD QLWSQEDRYW QQRSRVQWLQ  540
EGDANMKFFH QFTLQRRRRN KVVSLKNNDG DWVDNPHQVR RLVDEHFMNL FTSLGTMKWG  600
EVLGCLTPKV SAEMNAALGG PVSVDDVNNA AMQMGGLKAS GPDGFPRIFY QAHWDTLAMD  660
VNDIIREMLL GTMDPRQINA IHLAWSSILV GRDILKWGAH WQIMDGNCVR VWIDKWLPTI  720
PVGRPSTLGT VQVSSNFIVG SLIDLENREW NIDFLKPFLV MEELDAILET QIGDPTLRDR  780
LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22570.1	2e-22	WRKY family protein