PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP006549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 420aa MW: 46833.7 Da PI: 8.0642 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.9e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl PCP006549.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.1 | 2.3e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ PCP006549.1 67 RGPFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVLDQNIGKE INNNNNITLS PTYKSNEKAS VGSNELSLVE AVSSKHPTSA 180 SENRFNPVEV SSTSKLISSN GGSSKSLTHE GSPSSCGPCD FVGYFSFPHH NNQNNYGSSS 240 DMGLQAVNQN TTFSFLNQNP EFLQPSMSSS SAIFTAPPPP PTRVKPSISL PSDNSSTWDS 300 NANNSNSSGG GYFDSSATFS WWPPEAVKSD DPEEIKWSEY LHNTSFQMGT HQASQPATYS 360 EIKPESQSHI LSNSLSATSW HHQNQQHQHQ HQHQHQQALQ ASEMYTKDLQ RLAVSFGQTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 8e-89 | MYB family protein |