PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005862.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 342aa    MW: 37369.5 Da    PI: 9.7356
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005862.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.5e-31270327359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  PCP005862.1 270 DDYSWRKYGQKPIKGSPYPRGYYKCSSErGCLARKHVERAVDDPTMLIVTYEGDHNHS 327
                  99*************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MALELMMGLI DSFAAKREEN AVKEAASAGI QSVEKFISLI SQHHHQSVSS NTEDETEYKE  60
VADMAVTKFR KVISLLDKGR IGHARFRKAP VTQIPTPSIS EPHDQETEQP SVFRAEQSSA  120
FKVYCPTPVV RLPPLPQNPH LKTTPVALKK GIGCAERKMD SPAAATISFS PSAPKTAANS  180
FISSLTAGDA AEQSISSGFQ FTNMSQSSSG RPPLSSSSLK RKCSSSDNVS RLRCGSTTGR  240
CHCSKTRKLK VKRVIRVPAI SMKLADIPPD DYSWRKYGQK PIKGSPYPRG YYKCSSERGC  300
LARKHVERAV DDPTMLIVTY EGDHNHSLSV TDPTATLILE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-90WRKY family protein