PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP005759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 32970.5 Da PI: 5.0402 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 64.8 | 1.7e-20 | 37 | 83 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT+eEd +l+d+v+++G g+W++ ar+ g++Rt+k+c++rw++yl PCP005759.1 37 GPWTAEEDSILIDYVNLHGEGRWNSLARHAGLKRTGKSCRLRWLNYL 83 89*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.1 | 2.4e-14 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++++++++ +G++ W++Ia++++ gRt++++k++w++ PCP005759.1 89 RGNITLQEQLIILQLHSSWGNR-WSKIAEYLP-GRTDNEIKNFWRT 132 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MDISNVHDQM KSAGYGSLEA AAAPDQPIEE GLGLRTGPWT AEEDSILIDY VNLHGEGRWN 60 SLARHAGLKR TGKSCRLRWL NYLRPSVRRG NITLQEQLII LQLHSSWGNR WSKIAEYLPG 120 RTDNEIKNFW RTRVQKQAKQ LKCDVNSKQF QDAMRYVWIP RLIERIGALP ESLADQPRTC 180 TTTTSEFECQ YWVDTNFVPK TSGNTSSDSY DLVQACSIPT DRTSSGDEFM TYPCSGQYGS 240 ENGSGYSQNG INSDIHGFKQ SDYCSTGGDT SVENLWNEEN IWFLQQQLSD D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 5e-75 | MYB family protein |