PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005728.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 329aa MW: 35679.8 Da PI: 7.1179

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005728.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PCP005728.1 141 YQCKTCDRCFPSFQALGGHRASH 163 9***********99999998887 PP
2	zf-C2H2	11.1	0.0012	232	254	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F + L H+r+H PCP005728.1 232 HECSVCGAEFASGQALGGHMRRH 254 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MMMMEAADHQ DQEEAVLGYK DQAQMMIIKG KRTKRQRLTS PLSAIATTAS SSSSAGHDHD 60 HLQDQGLVGP RQRIGTDVGP TASPATSSDQ FTEISTEEEE DMANCLILLA QGNSTPKPQN 120 PNSVNNNKAA SAAASAGLYL YQCKTCDRCF PSFQALGGHR ASHKKPGKQA NIHSTIQDNK 180 KALSFVEEVE EFDLFNNTST TLSLQISNRA FRALNSDTTS PCYNKNKANK VHECSVCGAE 240 FASGQALGGH MRRHRTLIST AAATAAAEAM SSHPQSQSES KRPRNVLQLD LNLPAPEEEH 300 LQETNKFPFG AKKEQVIVFS ASPLVGCQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	8e-51	C2H2 family protein