PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005619.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1398aa MW: 159565 Da PI: 7.5959

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005619.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99	5.2e-31	89	180	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r++tr+gCka++ vk++++g+w+v+ +++eHnHel+p PCP005619.1 89 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASFSVKMQDSGRWVVSGFVKEHNHELVP 180 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1398 aa Download sequence
MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMGSATGSGS GIVFGGGGSG 60 EIYLPEGDLL DLEPYDGMEF ESEEAAKAFY NSYARRVGFS TRVSSSRRSR RDGAIIQRQF 120 VCAKEGFRNL NEKRTKDREI KRPRTVTRVG CKASFSVKMQ DSGRWVVSGF VKEHNHELVP 180 PDQVHCLRSH RQISGPAKTL IDTLQAAGMG PRRIMSALIK EYGGISKVGF TEVDCRNYMR 240 NNRQKSLDGD IQMLLDYLRQ MQADNQNFFY AVQGDGDKSM GNVIWADPKA RINYSYFGDT 300 VTFDTTYRSN RYRLPFAPFT GVNHHGQPVL FGCAFLINES EASFVWLFKT WLMAMSGRPP 360 VSITTDHDPV IQSAIKQVFP QTRHRFCKWH VFKKCQEKLS HVFLKHPTFE ADFHKCVNLT 420 ESIEEFESYW LSLVDKYSLR DHEWIQMVYS ARRQWVPVYL RDTFFAEMSI TQRSDSMNSY 480 FDGYVNASTN LSQFFKLYEK ALESRNEKEV KADFETMNTA PVLKTPSPME KQASELYTKK 540 IFMRFQEELV GTLTFTASKG DDDGEIITYQ VAKFGEDHKA YYVKLNVLEM MATCSCQMFE 600 FSGLLCRHVL AVFRVTNVLT LPSHYILKRW TRNAKSSVML EERSSDVYTN YLESHTVRYN 660 TLRHEAFKFV DGARSSETYD IAVEALKEAA KKVAHAIKNE GKAMLNGHVR GSLAGGASRA 720 AHCASGDHEG SSGQHLSEDD MDKKIRELTN ELECAKRKCE VYRANLRSVL KDIEDHKLQL 780 SIKVVVLASD IRSIGKYKWV GNWQGPYCRL WILAVDLTRD RLDTSHEEKS LCEWLHKKTD 840 IRAERFIRLS PCFRIESNTV QYDTETESLS SGGWEIKLRS YMSGVRQRTL GGGGQHVLDY 900 LKRMQADNPA FFYAVQSDSD HSSGNIFWVD ATARMNYTYF GDAVIFDTSY RINRYRVPFA 960 SFSGFNHHGQ PVLFGCALIL NESESSFVWL FQTWLHAMAG RLPVSITTDP DRHMQVAVAQ 1020 ILPETRHRFC KWAIFKQTQE KLDQLYHSHP TFETEFKKCV NESETIDEFE SRWQSLLGRY 1080 YIMDNEWLQS MYNARQQWVP VLIKQYEKAL VSWHEMELKA DYDTTNTMPV LKTPSPMEKQ 1140 AANLYTRRIF KKFQEELVET MANPATKIDD SGTVATYRVA KFGEDHKAHA VSYNSFEMKA 1200 SCSCQMFEYS GIICRHILAV FRAKNVLKLP PQYVLKRWTR NAKSGAGGAM LDERASESPS 1260 NSRESVTVRY NNLRQEAIKY VEEGARSIHI YNVAMNALQE AAKKVAATKN KGSGATQGSS 1320 LANGGSQEIP ATEANEMAGY QSTDEKEKKI CELSAELENT NKRCEVYRAN LLAVLRDMEE 1380 QKSKLSVKVQ SARLSLKE

Sequence ? help Back to Top

Protein Sequence Length: 1398 aa Download sequence

MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMGSATGSGS GIVFGGGGSG  60
EIYLPEGDLL DLEPYDGMEF ESEEAAKAFY NSYARRVGFS TRVSSSRRSR RDGAIIQRQF  120
VCAKEGFRNL NEKRTKDREI KRPRTVTRVG CKASFSVKMQ DSGRWVVSGF VKEHNHELVP  180
PDQVHCLRSH RQISGPAKTL IDTLQAAGMG PRRIMSALIK EYGGISKVGF TEVDCRNYMR  240
NNRQKSLDGD IQMLLDYLRQ MQADNQNFFY AVQGDGDKSM GNVIWADPKA RINYSYFGDT  300
VTFDTTYRSN RYRLPFAPFT GVNHHGQPVL FGCAFLINES EASFVWLFKT WLMAMSGRPP  360
VSITTDHDPV IQSAIKQVFP QTRHRFCKWH VFKKCQEKLS HVFLKHPTFE ADFHKCVNLT  420
ESIEEFESYW LSLVDKYSLR DHEWIQMVYS ARRQWVPVYL RDTFFAEMSI TQRSDSMNSY  480
FDGYVNASTN LSQFFKLYEK ALESRNEKEV KADFETMNTA PVLKTPSPME KQASELYTKK  540
IFMRFQEELV GTLTFTASKG DDDGEIITYQ VAKFGEDHKA YYVKLNVLEM MATCSCQMFE  600
FSGLLCRHVL AVFRVTNVLT LPSHYILKRW TRNAKSSVML EERSSDVYTN YLESHTVRYN  660
TLRHEAFKFV DGARSSETYD IAVEALKEAA KKVAHAIKNE GKAMLNGHVR GSLAGGASRA  720
AHCASGDHEG SSGQHLSEDD MDKKIRELTN ELECAKRKCE VYRANLRSVL KDIEDHKLQL  780
SIKVVVLASD IRSIGKYKWV GNWQGPYCRL WILAVDLTRD RLDTSHEEKS LCEWLHKKTD  840
IRAERFIRLS PCFRIESNTV QYDTETESLS SGGWEIKLRS YMSGVRQRTL GGGGQHVLDY  900
LKRMQADNPA FFYAVQSDSD HSSGNIFWVD ATARMNYTYF GDAVIFDTSY RINRYRVPFA  960
SFSGFNHHGQ PVLFGCALIL NESESSFVWL FQTWLHAMAG RLPVSITTDP DRHMQVAVAQ  1020
ILPETRHRFC KWAIFKQTQE KLDQLYHSHP TFETEFKKCV NESETIDEFE SRWQSLLGRY  1080
YIMDNEWLQS MYNARQQWVP VLIKQYEKAL VSWHEMELKA DYDTTNTMPV LKTPSPMEKQ  1140
AANLYTRRIF KKFQEELVET MANPATKIDD SGTVATYRVA KFGEDHKAHA VSYNSFEMKA  1200
SCSCQMFEYS GIICRHILAV FRAKNVLKLP PQYVLKRWTR NAKSGAGGAM LDERASESPS  1260
NSRESVTVRY NNLRQEAIKY VEEGARSIHI YNVAMNALQE AAKKVAATKN KGSGATQGSS  1320
LANGGSQEIP ATEANEMAGY QSTDEKEKKI CELSAELENT NKRCEVYRAN LLAVLRDMEE  1380
QKSKLSVKVQ SARLSLKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein