PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP005259.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 575aa MW: 62467.7 Da PI: 9.6141 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.6 | 9.1e-11 | 12 | 54 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT e d+ + +a + ++ + +W++Ia+ ++ g+tl+++++++ PCP005259.1 12 WTREQDKAFENALAIYPEDssdRWEKIAADVQ-GKTLEEIRHHY 54 ********************************.**********9 PP | |||||||
2 | Myb_DNA-binding | 26.3 | 1.7e-08 | 170 | 207 | 10 | 47 |
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky PCP005259.1 170 RLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 207 689999*******************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 575 aa Download sequence |
MTVEEAGCSS LWTREQDKAF ENALAIYPED SSDRWEKIAA DVQGKTLEEI RHHYDLLLED 60 ISQIEAGVVP LPCYNSSSEG STSHASDEGT NKKGGHSGNY SNESNHGSKA SRADQERRKG 120 IAWTEDEHSF WHTALLHWAK KPLVLNLALA DLNSNCYHEN WFVYGRIELR LFLLGLEKYG 180 KGDWRSISRN FVVTRTPTQV ASHAQKYFIR LNSMNKDRRR SSIHDITSVN NGEISAAQGP 240 ITGQANGAAV GSSGKSTKQS PAGAPGVGMY GSAPSIGQPI GGPLVSAVGT PVNLPAPPHM 300 AYGVSAPVPG VVPGAPMNMV PMTYPMPHSS HSYSSSSNMK ASLQGQVIGI PINSAAAYAL 360 KSADHGAAIQ YHHNIPAPAP SDATEPSKLI RQSRLYSVLN RMNKLTNKAD SFAHGVKEHV 420 RLGPKITETV KGKLRLGAKI VKAGGTLEVF KHAFSVKAGE KLLKASQCYL STTAGPMAGL 480 LFISTDKIAF CSERSIKLPS SDSDGQQLVS RVHYKVVIPV KKIKAVNQSE NTKKPSQKYV 540 EIVTADDFDF WFMGFLNYQK TLKYLQQAIN IPSQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-104 | MYB family protein |