PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005185.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 424aa MW: 45391.8 Da PI: 7.4694

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005185.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133	2.7e-41	95	226	2	114
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + PCP005185.1 95 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssyysp 192 789******************************************************************99987777777777555555555556666 PP TCP 89 ...................kaaksaakskksqksaasalnlakes 114 + ++s+++ ln++ +s PCP005185.1 193 nfslhqnqrrslfqgiglsS-----------SDSSSTLLNFQTNS 226 66666666333333333331...........33333334444433 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MEGGDDHQLH HHHHHHYQQH QQQYHHRPNF PFQLLEKKEL DHQEAASCSN STSPYPSLAI 60 TTVDPTTNNN TSSTPAATTT SALQASSAEP SKKPPPKRTS TKDRHTKVDG RGRRIRMPAL 120 CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSSMS 180 VPSQLRSSYY SPNFSLHQNQ RRSLFQGIGL SSSDSSSTLL NFQTNSMHAS MLQAKQELRD 240 TVSLDLSEAA SAGEGSMGGR KRRPPEQDLN QMGGCCGGGG GGYLLQSSTG AVPASHPHSQ 300 IPANFWMLAN SNNQVMSGDP IWTFPASVNN SGLYRGTMPG GLHFMNFPAP VTLLPSQQQL 360 GGSGGGGGSN DGNNMSDGQL NMLAGLNPYR QMSDTGVSDS QQASGSHSHH GGGDDRHDST 420 SHHS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MEGGDDHQLH HHHHHHYQQH QQQYHHRPNF PFQLLEKKEL DHQEAASCSN STSPYPSLAI  60
TTVDPTTNNN TSSTPAATTT SALQASSAEP SKKPPPKRTS TKDRHTKVDG RGRRIRMPAL  120
CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNI SLRSSGSSMS  180
VPSQLRSSYY SPNFSLHQNQ RRSLFQGIGL SSSDSSSTLL NFQTNSMHAS MLQAKQELRD  240
TVSLDLSEAA SAGEGSMGGR KRRPPEQDLN QMGGCCGGGG GGYLLQSSTG AVPASHPHSQ  300
IPANFWMLAN SNNQVMSGDP IWTFPASVNN SGLYRGTMPG GLHFMNFPAP VTLLPSQQQL  360
GGSGGGGGSN DGNNMSDGQL NMLAGLNPYR QMSDTGVSDS QQASGSHSHH GGGDDRHDST  420
SHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	6e-38	TCP family protein