PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 707aa MW: 79392.8 Da PI: 6.4374 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l ++++ G g W+ +++ g++R++k+c++rw++yl PCP004994.1 14 RGAWSAWEDKILTNYIETNGEGKWRDLPQRAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4.1e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP004994.1 67 RGNISGEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 677788****************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MGRKPCCDKE GLNRGAWSAW EDKILTNYIE TNGEGKWRDL PQRAGLNRCG KSCRLRWLNY 60 LRPDIKRGNI SGEEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLSKKTEQGS 120 DKAPRPERTS TTNSNEYTPK PKPASKSHQT VQVIRTKAFK CRKVVIPSHL DDHDQMVDRL 180 NVNPGLVPCE CPSSSASQDP QEDSPPCGFL IDFNIDDLFI SDLLKTENFL QDQIDKCDQE 240 MEDGIIKLEG LMGEAMLENS TASVHDHHDD QIFQPKDDHD RVHGLNAISY FLNLEDDHEK 300 WSRNLVGRGS WLEHTAPRGV GTLVDYRAPA CQDAARGEQT QGNTETTDIR SDKEDADVLI 360 LQEAATEAER REARECGDIY ELFGDSEAEE EAEANTRTPR LVRTVLVETS DSELEKQPKP 420 KRATLTRKST RSQTSQSSKA VSALNTSNVV VSVTGRQKRT SSKVTNPQAS RADPIDVPEA 480 SEVFASHPQV SIEGSSTVSH SLVSHDSLSQ QSREVTPPQP PSKAPGLTQG SGEGSGKSPP 540 HIVCKRDLPR PFSVFGITGI SVPKHAQYKS FMSFFENLRA LRDQHQKAKW ASNRVKRFQE 600 KHVKSTAALW QLVEEGSVME ERIAVVDSEI QRLEKQLCSL KAEKVTLTNH LSQKVEHMEK 660 ISQEVVDPKT QFVNNNMYFG ESSQIFTIMQ TYFSKIVALA EDVKLLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-58 | MYB family protein |