PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 227aa MW: 25698 Da PI: 6.5981 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.9 | 1.2e-15 | 119 | 210 | 9 | 99 |
HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + + + ++lp k + ++ k s +tl+ +gr+W+v+++ + ++ + l+ GW eFv+ n+L++gD++v+ l+ +++ + v +fr+ PCP004850.1 119 TYINGHSVWLPSKLCIHMrrL-GK-HSGAVTLRAFDGRTWSVEMKCeKATRPKLRLQYGWTEFVRGNNLEVGDVCVLVLIYDTKLVFEVVIFRT 210 445556799******888852.34.3448***************874444445*************************9988888888888886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MPEMEETDED DDSHNSSWDD DDDSDCVEVL DNIMSAQEKQ GTNLHCHVLD LIRSTEQVQP 60 AEFAYKRHGE VTSSTPKRAQ TVLGSMHASN ARGKAAVALR RATAFKSDNP YFIVPMKRTY 120 INGHSVWLPS KLCIHMRRLG KHSGAVTLRA FDGRTWSVEM KCEKATRPKL RLQYGWTEFV 180 RGNNLEVGDV CVLVLIYDTK LVFEVVIFRT TETAHTFSPP GTLSFNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 9e-12 | B3 family protein |