PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004512.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 442aa MW: 48241.9 Da PI: 5.3814

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004512.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	52.2	1.2e-16	226	265	21	59
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PCP004512.1 226 RRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 265 599***998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MPTTRMEKFQ GDLTDILRAG TTTATVGADP SDHQEPYTDS WHFPYDHPMI FPSSSSAMEE 60 EEETKDNFGD PFLSYMRDPL LNELDISSSS LFSSPNCTAR AEEGVTTTTF GSGGDGSHHV 120 LSLGHHNHQS GRVVVDGDPI KRPYNIFSRM LQISPSAKVP VSPCDSPVMG ASVSSSTSGV 180 KTSSASAAMV ASDMIINGNS SSAAKGCLLE NTGMQISSPR NPGIKRRGYY RCSSSKGCSA 240 RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ PSKKGGAAAL KISPDSSHQP 300 HQKPTSPTKE EQNENVNDND DNHMSPTVIT AGSASTVKEE FEDIEKQLEL DHHHQQLGFA 360 YRPSMPDEQS NQSHHPDDFF ADLGEIEADP LNLLFSQCFS VDEQQQKGGK AAEPLDPFNL 420 LDNWSGDHNT NNTSFAEAKR RL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MPTTRMEKFQ GDLTDILRAG TTTATVGADP SDHQEPYTDS WHFPYDHPMI FPSSSSAMEE  60
EEETKDNFGD PFLSYMRDPL LNELDISSSS LFSSPNCTAR AEEGVTTTTF GSGGDGSHHV  120
LSLGHHNHQS GRVVVDGDPI KRPYNIFSRM LQISPSAKVP VSPCDSPVMG ASVSSSTSGV  180
KTSSASAAMV ASDMIINGNS SSAAKGCLLE NTGMQISSPR NPGIKRRGYY RCSSSKGCSA  240
RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ PSKKGGAAAL KISPDSSHQP  300
HQKPTSPTKE EQNENVNDND DNHMSPTVIT AGSASTVKEE FEDIEKQLEL DHHHQQLGFA  360
YRPSMPDEQS NQSHHPDDFF ADLGEIEADP LNLLFSQCFS VDEQQQKGGK AAEPLDPFNL  420
LDNWSGDHNT NNTSFAEAKR RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-44	WRKY family protein