PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004478.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 862aa MW: 98835.2 Da PI: 6.4546

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004478.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.2	1.1e-26	103	205	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerr....traetrtgCkaklkvkkekdgkwevtkle 82 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ + +r+ ++t+Cka+++vk++ dgkw++++++ PCP004478.1 103 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdP----EnptgRRSCSKTDCKASMHVKRRPDGKWVIHNFV 196 5****************************************99999999977655443....144559999********************* PP FAR1 83 leHnHelap 91 +eHnHel p PCP004478.1 197 KEHNHELLP 205 ****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
MFSDSNQLKL NNLTMDIDLR LPSGEHGKED EEPHEIDNLL EHEEKAHNGD IASENIEDIR 60 DEVRVEDGGD LNSPTPDMVV FKEDTNLEPL FGMEFESHGE AYSFYQEYAR SMGFNTAIQN 120 SRRSKTSREF IDAKFACSRY GTKREYDKSY NRPRARQNKQ DPENPTGRRS CSKTDCKASM 180 HVKRRPDGKW VIHNFVKEHN HELLPAQAVS EQTRKMYAAM ARQFAEYKNV VGLKSDPKNP 240 FDKGRNLALE AGDLKILLEF FMQMQSMNSN FFYAVDLGED QRLKSLFWVD AKSRHDYVHF 300 SDIVSFDTTY VRNKYKMPLA LFVGVNQHYQ FVLLGCALVS DESTSTFSWL MQTWLKAMGG 360 QAPKVIITDH DKSIKSVVVE VFPNAYHCFC LWHILGKVSE NLGHVIKQHQ NFMAEFEKCI 420 HRSSTNEEFE KRWWEILENF DLKEDEWTQL LYEDRKQWVP TYMRDVCLAG MSAGQRSDSV 480 NSFFDKYVHK KTTVQEFLKQ YEAILQDRYD EEAKADYDTW NKPPTLRSPS PLEKSVSGLY 540 THAVFKKIQG EVLGAVACHP KRERQDETGT IFKVQDFEKN EDFIVTWNEM KTEVSCACCL 600 FEYKGYLCRH ALIVLQICGL SAIPSQYVLK RWTKDAKSRH LVGEDSDIVL SRVQKFNDLC 660 QRAMKVIEEG TLSQESYSVA CRALEEAFGN CVSVNNSSKS LLEAGTSVTH GLLCIEDDNQ 720 NRSMSSKTNK KKNPTKKRKV NSEPEVMAVG AQDSLQPMEK LNSRAATLDG YYGAQPNVQG 780 MVQLNLMAPT RDNYYGNQQT IQGLGQLNSI APSHDGYYSA QQSMHGLGQM DFFRTPTGYV 840 YGIRDDPNVR TAPLHEDASR HA

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

MFSDSNQLKL NNLTMDIDLR LPSGEHGKED EEPHEIDNLL EHEEKAHNGD IASENIEDIR  60
DEVRVEDGGD LNSPTPDMVV FKEDTNLEPL FGMEFESHGE AYSFYQEYAR SMGFNTAIQN  120
SRRSKTSREF IDAKFACSRY GTKREYDKSY NRPRARQNKQ DPENPTGRRS CSKTDCKASM  180
HVKRRPDGKW VIHNFVKEHN HELLPAQAVS EQTRKMYAAM ARQFAEYKNV VGLKSDPKNP  240
FDKGRNLALE AGDLKILLEF FMQMQSMNSN FFYAVDLGED QRLKSLFWVD AKSRHDYVHF  300
SDIVSFDTTY VRNKYKMPLA LFVGVNQHYQ FVLLGCALVS DESTSTFSWL MQTWLKAMGG  360
QAPKVIITDH DKSIKSVVVE VFPNAYHCFC LWHILGKVSE NLGHVIKQHQ NFMAEFEKCI  420
HRSSTNEEFE KRWWEILENF DLKEDEWTQL LYEDRKQWVP TYMRDVCLAG MSAGQRSDSV  480
NSFFDKYVHK KTTVQEFLKQ YEAILQDRYD EEAKADYDTW NKPPTLRSPS PLEKSVSGLY  540
THAVFKKIQG EVLGAVACHP KRERQDETGT IFKVQDFEKN EDFIVTWNEM KTEVSCACCL  600
FEYKGYLCRH ALIVLQICGL SAIPSQYVLK RWTKDAKSRH LVGEDSDIVL SRVQKFNDLC  660
QRAMKVIEEG TLSQESYSVA CRALEEAFGN CVSVNNSSKS LLEAGTSVTH GLLCIEDDNQ  720
NRSMSSKTNK KKNPTKKRKV NSEPEVMAVG AQDSLQPMEK LNSRAATLDG YYGAQPNVQG  780
MVQLNLMAPT RDNYYGNQQT IQGLGQLNSI APSHDGYYSA QQSMHGLGQM DFFRTPTGYV  840
YGIRDDPNVR TAPLHEDASR HA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein