PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004431.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 173aa MW: 19110.3 Da PI: 9.6239

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004431.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00088	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H PCP004431.1 41 FVCKTCDREFPSFQALGGHRASH 63 89**********99999998887 PP
2	zf-C2H2	13.2	0.00027	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F+ L H+r+H PCP004431.1 92 HECPVCGLEFTVGQALGGHMRRH 114 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MKRSGQDETL DMVNCLMLLS KVGEPDSSPI KYENSKKDRV FVCKTCDREF PSFQALGGHR 60 ASHKKPKLMP GGAVDLLHLA EFPGLPVKPK KHECPVCGLE FTVGQALGGH MRRHRDVIQA 120 AAARAQPSPP MPVLKKSNSS KRVSCLNLEL NLDLHLAPPG HHQYDLTKLQ MIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-34	C2H2 family protein