PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 231aa MW: 26243.5 Da PI: 7.6947 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 92.6 | 5e-29 | 64 | 152 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r++ +++sk++g+++ rt+vC+keg+r++++++ +k+ ++ra+tr+gC+a+l +kk + gkw+vt ++ eH+H+l+p PCP004416.1 64 FYNAYATRMGFVTRMNDMYRSKHDGTVIGRTLVCNKEGFRKPDRRD-KKTLKPRAQTRVGCRAMLSIKKLSVGKWVVTWFVREHTHALTP 152 *******************************************999.99**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MTHESDGASV GTSLVDMSHL FGQDDDDDDD QRTPNSCKDG SSLVQPHEPY VGQEFDSQES 60 ALAFYNAYAT RMGFVTRMND MYRSKHDGTV IGRTLVCNKE GFRKPDRRDK KTLKPRAQTR 120 VGCRAMLSIK KLSVGKWVVT WFVREHTHAL TPNKALKGLV NDQVPDDKTK IAELTNELFL 180 ERKRSAALRE IVDLLFNHIE EHTQDLSKKV QHVVDNVKEL ESEGKNRRSL G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-70 | FAR1 family protein |