PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004366.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 536aa MW: 59276.4 Da PI: 6.9413

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004366.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.1	8.2e-33	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++++vkgLtl+h+kSHLQkYRl PCP004366.1 42 KPRLRWTAELHDRFVDAVTQLGGPDKATPKTIMRTLGVKGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	73	4.6e-23	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav+qlGg+ t+ktI+rt+g kg+tl+++ks++qky+ PCP004366.1 44 RLRWTAELHDRFVDAVTQLGGPdkaTPKTIMRTLGvKGLTLYHLKSHLQKYR 95 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MYSSIHSLPL DGSAGGHENY GGSLDGSNLP GDGCLVLTTD PKPRLRWTAE LHDRFVDAVT 60 QLGGPDKATP KTIMRTLGVK GLTLYHLKSH LQKYRLGKQS CKDSAEISKD GIAASCIAES 120 QDTGSSSATS SRVIAEDLND GFQVTEALRV QMEVQRRLHE QLECKQVQCR LQLRIEAQSK 180 YLQSILEKAC KALKDQATSA TGLEAAKEEL SELAIGVSND SEGIVLLHSA KMPSLSELAA 240 ALENRDASNV MVCLGNCSVD SCLTSTGSPV LPMDMSSLAA AMKKRQRPFF GNGDSLPLES 300 NMRQEVEWIM RVQEQGGCLQ ARPNILCRGY IDEAKTNVAV NLEYLHLMED MDRFNNFAWG 360 SISFEQLHDS LSFVALRRGR GRVEGDGVGD EEEEEEVKGT KHLADQHTVL IWEMFMVETL 420 LVSILVTPNF KCLVCQGDPQ FHHSGTPCIS LGEKQKGRGS RRKKKNWSRQ CRRKRFPCSL 480 QKAKGLKMCN AAVATTGGGL RTIAGEGNCC LESEVWIMQR WREAWKGKEY EKDDER

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MYSSIHSLPL DGSAGGHENY GGSLDGSNLP GDGCLVLTTD PKPRLRWTAE LHDRFVDAVT  60
QLGGPDKATP KTIMRTLGVK GLTLYHLKSH LQKYRLGKQS CKDSAEISKD GIAASCIAES  120
QDTGSSSATS SRVIAEDLND GFQVTEALRV QMEVQRRLHE QLECKQVQCR LQLRIEAQSK  180
YLQSILEKAC KALKDQATSA TGLEAAKEEL SELAIGVSND SEGIVLLHSA KMPSLSELAA  240
ALENRDASNV MVCLGNCSVD SCLTSTGSPV LPMDMSSLAA AMKKRQRPFF GNGDSLPLES  300
NMRQEVEWIM RVQEQGGCLQ ARPNILCRGY IDEAKTNVAV NLEYLHLMED MDRFNNFAWG  360
SISFEQLHDS LSFVALRRGR GRVEGDGVGD EEEEEEVKGT KHLADQHTVL IWEMFMVETL  420
LVSILVTPNF KCLVCQGDPQ FHHSGTPCIS LGEKQKGRGS RRKKKNWSRQ CRRKRFPCSL  480
QKAKGLKMCN AAVATTGGGL RTIAGEGNCC LESEVWIMQR WREAWKGKEY EKDDER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	461	475	RRKKKNWSRQCRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.2	1e-110	G2-like family protein