PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004329.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 473aa MW: 51291.6 Da PI: 7.4175

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004329.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.1e-32	257	312	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PCP004329.1 257 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 312 68****************************************************97 PP
2	Myb_DNA-binding	40.3	7.2e-13	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ PCP004329.1 259 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 310 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MASSPSELIS YSMLLKSFGD LQASHLHDQP QTQKLEEFLS RLEEERLKID AFKRELPLSM 60 QLLTTAVEAS RQQLQAYRTN NIQGQTRPVL EEFIPLKHST SEGSEKPTNP TSDKANWMTS 120 AQLWSQATDH NPSATSKSQS TITSGPKEAD IGFSVSPKLG LDTKQPRSYG GGAFLPFSKD 180 RSPTLRPLPE LALASPENKA EIILEDHHEN GNNNSSSAAG NCNEQGKLLG AGGINNNSEG 240 QNGQTTTAAA AAQTHRKARR CWSPDLHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND 300 EVKSHLQKYR LHTRRPSPSP QAGGGPAPQL VVLGGIWVPQ EYATAAHNGP TALYSPHPGS 360 HAPTHYCATP MPQDFCAMQQ QQLHHHTLQH QLHMYRTSTA SHTQSSPESD GRGAGDRSGS 420 IEEGKSDSSS WKGTESGDHV HMNGGDQRNG GGLAARRSED GGDSNGSQIT LKF

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MASSPSELIS YSMLLKSFGD LQASHLHDQP QTQKLEEFLS RLEEERLKID AFKRELPLSM  60
QLLTTAVEAS RQQLQAYRTN NIQGQTRPVL EEFIPLKHST SEGSEKPTNP TSDKANWMTS  120
AQLWSQATDH NPSATSKSQS TITSGPKEAD IGFSVSPKLG LDTKQPRSYG GGAFLPFSKD  180
RSPTLRPLPE LALASPENKA EIILEDHHEN GNNNSSSAAG NCNEQGKLLG AGGINNNSEG  240
QNGQTTTAAA AAQTHRKARR CWSPDLHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND  300
EVKSHLQKYR LHTRRPSPSP QAGGGPAPQL VVLGGIWVPQ EYATAAHNGP TALYSPHPGS  360
HAPTHYCATP MPQDFCAMQQ QQLHHHTLQH QLHMYRTSTA SHTQSSPESD GRGAGDRSGS  420
IEEGKSDSSS WKGTESGDHV HMNGGDQRNG GGLAARRSED GGDSNGSQIT LKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	6e-89	G2-like family protein