PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004307.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 297aa MW: 33028.7 Da PI: 4.5512

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004307.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97	1.4e-30	63	117	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+WtpeLH+rFv+av+qLGG++k tPk++ ++m+++g+tl +vkSHLQkYRl PCP004307.1 63 RPRLQWTPELHTRFVDAVNQLGGPHKSTPKKVQQAMGIQGITLFQVKSHLQKYRL 117 59****************************************************8 PP
2	Myb_DNA-binding	56.4	6.7e-18	65	116	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ ++vdav+qlGg+ t+k++ + mg +g tl q+ks++qky+ PCP004307.1 65 RLQWTPELHTRFVDAVNQLGGPhksTPKKVQQAMGiQGITLFQVKSHLQKYR 116 789************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MVGFGCRGGD EQDFQGSCPT PIVTRSDDRV VLEGGEAAVV EEVDRETRDL QLPQDCVLKA 60 KLRPRLQWTP ELHTRFVDAV NQLGGPHKST PKKVQQAMGI QGITLFQVKS HLQKYRLGRY 120 SGKEWTEGTQ ISKETSGSQD LEEGLSTRRT PLQLPQTARM PSDELVKAAA DEERIRMQIE 180 AGRQLQLWQD AEQRYMNFAM ENAHKKLAEQ FFGGAIAAGV LNGVSGLGTM ELYPAYQMTA 240 GSSMQPSHEG HSTSYGRSEN SSVENFQTCT EDDEKTEQSL DDDPAEAYLI DPDPDME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-34	G2-like family protein