PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004136.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 376aa    MW: 42498 Da    PI: 4.8652
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004136.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.92.2e-25198287189
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                  +fY++YA+++GF +r+ + ++s+ +++i +r++ C+k+g r+ + ++  ++ rr++++t  gCka++ vk++k+gkw++t+++++H+H+l
  PCP004136.1 198 EFYEDYARRAGFIMRIGQCRRSHVEKRILSRKLSCNKQGGRSVKARDqVRSVRRPQPTTGEGCKAMMLVKLKKSGKWVITRVVKDHTHPL 287
                  6****************************************99998845567889*********************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MDKAELRRVF HMFDQNGDGR ITKKEMRDSL EKLGIYIPDK DLIQMIEKID VNGDGFVDMD  60
EFGALYQTIM DERDEEEDMR EAFNVFDQNG DGFITVDELR SVLSSLGLKQ GKTLEDCTIM  120
IKKVDVDGDG RVNFKEFKQM MKGEHKAVEP LENSKDGGAG ADGAGDARAP ETSVERDLNA  180
VGEPYVGMEF ESEDAAKEFY EDYARRAGFI MRIGQCRRSH VEKRILSRKL SCNKQGGRSV  240
KARDQVRSVR RPQPTTGEGC KAMMLVKLKK SGKWVITRVV KDHTHPLIVS SGNSMDAKDM  300
KIAELTLDLE REEQLCGQYR ELLLTLLNHV EEETEDIATK VRGVVNYVRE FETQVEGIPE  360
NQMESSSRAS SKSNGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-57FAR1 family protein