PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004135.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 324aa    MW: 36847.2 Da    PI: 8.4695
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004135.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1972.1e-3059146290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  fY++YA++vGF +r+++ ++s r+g++++r++vC+keg+r+++ k  +++r++ra tr gCka+++vkk+k+gkw+vt++ +eHnH+l+
  PCP004135.1  59 FYDAYATQVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRAKG-TENRKPRAITREGCKAMIVVKKDKSGKWVVTRFIKEHNHPLV 146
                  9********************************************9.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MESYHNAYLA VDDEELSMSK DEDVSESSNG KDAVTSEGNL DAEPFVGMEF ETEEAAKVFY  60
DAYATQVGFI MRVDAFRRSM RDGKVVWRRL VCNKEGFRKT RAKGTENRKP RAITREGCKA  120
MIVVKKDKSG KWVVTRFIKE HNHPLVGTPA NGRRSMLLSQ TPLVCLLVLV TMVNYLVYVR  180
CRFESASGVL VSVALKWFGA FASWKVTFCL CILHDINRNS GLWMKSADAP CLNSSSLDGF  240
FWYCAIAYHG YGKCCTCKDE KDLKIRELTA ELQRERKRSA TYQEQLDTVL REMEQHSNHL  300
SRNIDVIVQS VKEIESKRVA LSNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-61FAR1 family protein