PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 230aa MW: 26500.2 Da PI: 7.3454 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 93.5 | 2.6e-29 | 69 | 157 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Y++YA++vGF++r+ + ++s+r+g+i +r+f C+keg+r+++++k+ + rr+r+etr gCka+++v+kek+gkw+vtkle++H H++ PCP004132.1 69 EYYDAYATRVGFRIRVGNFHRSNRDGSINSRKFLCNKEGFRDNKQSKRGEVRRPREETREGCKAMIMVRKEKSGKWVVTKLETKHCHPM 157 69*************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAADPTPMES EADLNRMVVE SPVERDILNT ESGEMLDSNN GTDLKENEVD GILEPYVGME 60 FDSEEAVKEY YDAYATRVGF RIRVGNFHRS NRDGSINSRK FLCNKEGFRD NKQSKRGEVR 120 RPREETREGC KAMIMVRKEK SGKWVVTKLE TKHCHPMWLS RGKRVTILAP SQDEKDKKIR 180 ELSAELYRAN QQLAECRKTL EMVLKEAQKS LSALELVEWL ERIRPCIVGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 7e-50 | FAR1 family protein |