PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 168aa MW: 19358.1 Da PI: 7.1437 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.4 | 5.3e-13 | 54 | 160 | 3 | 95 |
EE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHH.HHHHHHT--TT-EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg...rsWevkliyrkksgryvltkGWk.eFvkangLkegDfvvFk 83 k l sd ++++rl +pk+ a++h ++k+ +t+ d++ + ++k+ +++++ yvl +GW+ +Fv gLke+D + ++ PCP004094.1 54 KRLAASDLGELSRLLMPKEAARKHvmsylddklakmvDSKEGL--PVTVVDRDTcnlHELTFKH--WNSGDFYVLNGGWRpKFVVRRGLKENDEIGLY 147 77899*******************9999888888865544444..4666677668789999999..*************878**************** PP E-SS.SEE..EEE CS B3 84 ldgr.sefelvvk 95 ld++ +++++ +k PCP004094.1 148 LDWDwKTANYIFK 160 ***9999988776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MKLEEEDHHP SKVRLFGVGL GSSLNDPCGG HEPSTDLYLW DPTWDYSSIW KIKKRLAASD 60 LGELSRLLMP KEAARKHVMS YLDDKLAKMV DSKEGLPVTV VDRDTCNLHE LTFKHWNSGD 120 FYVLNGGWRP KFVVRRGLKE NDEIGLYLDW DWKTANYIFK FSVLQGAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 3e-17 | B3 family protein |