PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 168aa MW: 19733.5 Da PI: 7.1627 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.8 | 1.4e-11 | 54 | 159 | 3 | 94 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS..............-EEEEEE..EEETTEEEE-TTHH.HHHHHHT- CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg..............rsWevkliyrkksgryvltkGWk.eFvkangL 74 k l sd ++++rl +pk+ +++h + d++ + ++k+ +++++ y+l +GW+ eFv gL PCP004092.1 54 KRLAASDLGELSRLLMPKEAVRKHvmsylddklakM-----------VDSKEglpvtvvdwdtcnrHELTFKH--WNSGDFYILNGGWRpEFVVRRGL 138 77889*******************776655555541...........44333355555555558667777777..*************879******* PP -TT-EEEEEE-SS.SEE..EE CS B3 75 kegDfvvFkldgr.sefelvv 94 ke+D + ++ld++ ++ ++ + PCP004092.1 139 KENDEIGLYLDWDwKTSKYIF 159 ***********9988777666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MKLEEEDHHP SKVRLFGIGL GSSLNDLRGG HELSTDLYLW DPTWDYSSIW KIRKRLAASD 60 LGELSRLLMP KEAVRKHVMS YLDDKLAKMV DSKEGLPVTV VDWDTCNRHE LTFKHWNSGD 120 FYILNGGWRP EFVVRRGLKE NDEIGLYLDW DWKTSKYIFT FSVLQRTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 1e-17 | B3 family protein |