PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004073.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 260aa MW: 30000.9 Da PI: 8.7178

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004073.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.3e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl PCP004073.1 23 KGPWTAEEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	53.9	4.2e-17	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++vd+++++G++ W+tIar ++ gRt++++k++w+++ PCP004073.1 76 RGQITPHEERIIVDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MYLGMMAGQH MGWGLIEEEG WRKGPWTAEE DRLLIEYVRV HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PHEERIIVDL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAVKGVS DASEKVKTRL LRRQQFYQQQ QLNQADLKKI MALLDENDNN KIPSCWPQVK 180 PDSETSTTTV CPHAADQEQG FFSSMLHENV YVPEPASTNE ENFLWDGLWN LDDIHGNFNT 240 TSACATGKTS LHSNLVVPLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13480.1	3e-83	MYB family protein