PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 248aa MW: 27868.4 Da PI: 8.5874 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.5 | 5.1e-13 | 126 | 221 | 1 | 87 |
EEEE-..-HHHHT.T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr 87 f+k++t dv+ + +rl+l k+ ++++ + +e++ +t++d++g +e++l+ ++++ r++ ++GWk+F ka+gL +Df+++ + ++ PCP004012.1 126 FEKQMTETDVNHLyQRLILYKNDVKRYlspllnekeD--LKEGVNVTVYDTDGVDYEIELSTWNSGTRVLAGEGWKNFRKAHGLMaYRDFLTLWMFRN 221 99********999999**************9988533..44889****************************************96689999876665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MTNRTTRKRS ARRTPSSSGT ANQPQNPPEA TEVVEALLGL TSGQIPSGLG TANQPQNSPQ 60 GIQCAQILYS FKQEALQNQE GGGGGGEEEV EQRSFYGIGN YVPSRLPPLP NHLLGLIQGQ 120 QCSNPFEKQM TETDVNHLYQ RLILYKNDVK RYLSPLLNEK EDLKEGVNVT VYDTDGVDYE 180 IELSTWNSGT RVLAGEGWKN FRKAHGLMAY RDFLTLWMFR NADTTKLCMF ISCRRLPVVQ 240 TIQRQGRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03170.1 | 3e-20 | B3 family protein |