PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003995.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 682aa MW: 73262.7 Da PI: 6.8209

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003995.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.2e-30	288	347	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ PCP003995.1 288 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGNHNHP 347 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MEAALGKSNS HGGSESEEKT VVLESSSIAD EQEAGHKEEI VLKVENGRPC QENNEVKSSS 60 PKQKDLSCKQ ISTTSNIKGS SAEPDHSVAS TSPSIKEQDC QLESARAEMG EIREENQRLK 120 KYLDQITEEY QTLQMQLYDI QQKANKSKDI AIPSTNKNYD QDEESELVSL SLGSFSGKPK 180 WNQKNDKNPS TSQGKVENES DGESLSLGLD CKYEAPKSSA TTNQVPLANP SPGSSLEEVP 240 KEEAGETWPP RKVLKTVRSS GMEDEVAQQS PAKKARVSVR ARCDTPTMND GCQWRKYGQK 300 IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA EDMSILITTY EGNHNHPLPM SATAMASTTS 360 AAASMLLSGS SSSSSGCFNP SATATSTTAA HDLHGYNFYL SDNSKSRFYI PNSSLSSSVP 420 TIILDLTSKP SPTSNSMSHF NKFSSSSSSS HQLYPPTSLN FGSNSESSTD MSWSHNGLLS 480 YGTHLPPYNI NNKNQSAPLS SLGIRQQPMQ NNIYQNYMQK NINPHPNPPQ GVPHQFQPDS 540 IAAATKAITS DPSFQSALAA VLTSIIGSNS TVGTTGITGT LGHINQAGGG DSSISLAQKF 600 KWSDHFPGST TTTTTSSSSP FLQSQIGNNS SSIGCASSYL NKTTPPNSQP GSLMFLPPSL 660 PFSSAPKSAS TSPDDTRDHK SL

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MEAALGKSNS HGGSESEEKT VVLESSSIAD EQEAGHKEEI VLKVENGRPC QENNEVKSSS  60
PKQKDLSCKQ ISTTSNIKGS SAEPDHSVAS TSPSIKEQDC QLESARAEMG EIREENQRLK  120
KYLDQITEEY QTLQMQLYDI QQKANKSKDI AIPSTNKNYD QDEESELVSL SLGSFSGKPK  180
WNQKNDKNPS TSQGKVENES DGESLSLGLD CKYEAPKSSA TTNQVPLANP SPGSSLEEVP  240
KEEAGETWPP RKVLKTVRSS GMEDEVAQQS PAKKARVSVR ARCDTPTMND GCQWRKYGQK  300
IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA EDMSILITTY EGNHNHPLPM SATAMASTTS  360
AAASMLLSGS SSSSSGCFNP SATATSTTAA HDLHGYNFYL SDNSKSRFYI PNSSLSSSVP  420
TIILDLTSKP SPTSNSMSHF NKFSSSSSSS HQLYPPTSLN FGSNSESSTD MSWSHNGLLS  480
YGTHLPPYNI NNKNQSAPLS SLGIRQQPMQ NNIYQNYMQK NINPHPNPPQ GVPHQFQPDS  540
IAAATKAITS DPSFQSALAA VLTSIIGSNS TVGTTGITGT LGHINQAGGG DSSISLAQKF  600
KWSDHFPGST TTTTTSSSSP FLQSQIGNNS SSIGCASSYL NKTTPPNSQP GSLMFLPPSL  660
PFSSAPKSAS TSPDDTRDHK SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-62	WRKY family protein