PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003911.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 1694aa MW: 184766 Da PI: 5.6829

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003911.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.5	1.8e-09	791	833	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++W +eE el+++ + +G++ +++Ia+ + ++t +c+++++k PCP003911.1 791 NPWKPEEKELFIQKLTIYGKD-FRKIASFLD-HKTTADCVEFYYK 833 69***************99.*****.*********98 PP
2	Myb_DNA-binding	29.1	2.3e-09	1010	1050	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ ++ I+r++ R++ qck ++ PCP003911.1 1010 DWTDEEKSSFIQAVSSYGKD-FAMISRCIR-SRSEHQCKVFFS 1050 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1694 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSGDF RRPPGHGKQG 60 ASLVFSDDSG HGCGSSRSGD KMLEDESFRP SFSRGDGRYG RNSRDNRGPP YSQRESKGHS 120 WDARSGSPNM PGRPNHNEQK SQDDMLTYSS HQLSDFGSTW DRIQKDQLDR MGGSTGLGAG 180 QKCERENSLG SIDWKPLKWT RSGSLSSRVS GFSHLSSSKS MGPIDSNEAM VDSQPKNATP 240 VQSPSGEATT GVTSAASSEE TTSRKKPRLG WGEGLAKYEK KKVEVPDASM NNDGAVCSFG 300 NTEPAHSLSS SLPDKSPRVT IFLDCASPAT PSSVVCSSSP GVEEKSFSKA VNIDNDIRNI 360 CGSPGHMSQS HHEGFSFQLE KLDSNSIVNL DSSLLELLQS DDPSSVDSSI WRPTALNKLL 420 IWKGEISKVL EVTESEIDSL ENELKALNSD SGGSCPHPAT SSSLPVEDKD KSCKEHVTNL 480 ITLPTALQIH SSGDTDVQKM CVDNRDQVEF CGIVNDEDID SPGTATSKFV EPLPLVSSSD 540 MMNQTGCSED WDPIQTTIGE ETCSVPSRCT EKTDPSTCGN SSMLLDKEIV APACGVVDKL 600 SDSIFSANKE FASRASDIFS KLLPKEQYEV DPSGVSVPSS WKNDPLIKEK FAKRKQHLRF 660 MERVVTLKFK AFQHLWKEDM HLLSMRKYRS KCHKNIELSL RATNNGHQKH RSSIRSRFST 720 PAGSLNLVPT TETINFTNKL LSDSQVKLYR NSLKMPALIL DKKEKMATRF VSSNGLVEDP 780 CAVENERALM NPWKPEEKEL FIQKLTIYGK DFRKIASFLD HKTTADCVEF YYKNHKSDCF 840 KKAKKKPDMA KQEKSSANTY LISNEKKWNR EMHAASLDIL GAASAIAAHA ESSTRNRQTY 900 SRRLILGGYK NTNTSHGDDT MVERPCSFDT IGNKRETAAA DVLAGICGSI SSEAVSSCIT 960 SSIDPVESYR EWKCQKVDSV VRRPLTPDVM HNVDDETCSD ESCGEMDPSD WTDEEKSSFI 1020 QAVSSYGKDF AMISRCIRSR SEHQCKVFFS KARKCLGLDL VHPRPGNGTS LGDDANGGGS 1080 DAEDACDLET GSGISSDKSG CNMNEDLPSS VTNMNDDEAD PAESMKLQTS PLRPEENNAM 1140 AEVDHGDGKP LKFLAFGDDT DIMDSGAMGG NVTENGILVA ESLPVGEGIN SDTPNPECMV 1200 GEKLVGQNSF DRFGKELEGG DERTNRGKSG CHIPVSVHDL CGNASDQATD GSCSGLNPEY 1260 LHEVSVELNS VQKPSVISLP LENPLATADT AGQDSAAIEC EKSLDQDRLS STPDLQEGRD 1320 HQCSKSVGED DSSKHLSGFP VYTNVEPSQV IRGYPLQIAT KKETNGDISC GNLSEAKPDR 1380 NINGHYITQD GFLQFGNCTP PCSEVDFPPV PLKVEQPGDS RKAHSWSSSD SDKPSRNGDV 1440 KLFGKILSNP SKSTSSIHEN EEGAHNHQLS NKASNLKFTG HHSADGSSPL LKFDCGSYLG 1500 LENVPRRSYG GFWEGNKVRT GFSSFPDSAI LLAKYPAAFS NFPTSSSQME QQPLQAVVKT 1560 SDGSINGVSI FPGMEINGSN GVVDYPVFSR GRDGGAKVQP FTVDVKQQRQ DMFDIPRRNG 1620 LDAITSLQQQ GRAIVGMNVM GRGGILVGGP CTGVSDPVAA IRMHYAKTEQ YGGQVGSIVG 1680 EEESWRGSKG DIGR

Sequence ? help Back to Top

Protein Sequence Length: 1694 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSGDF RRPPGHGKQG  60
ASLVFSDDSG HGCGSSRSGD KMLEDESFRP SFSRGDGRYG RNSRDNRGPP YSQRESKGHS  120
WDARSGSPNM PGRPNHNEQK SQDDMLTYSS HQLSDFGSTW DRIQKDQLDR MGGSTGLGAG  180
QKCERENSLG SIDWKPLKWT RSGSLSSRVS GFSHLSSSKS MGPIDSNEAM VDSQPKNATP  240
VQSPSGEATT GVTSAASSEE TTSRKKPRLG WGEGLAKYEK KKVEVPDASM NNDGAVCSFG  300
NTEPAHSLSS SLPDKSPRVT IFLDCASPAT PSSVVCSSSP GVEEKSFSKA VNIDNDIRNI  360
CGSPGHMSQS HHEGFSFQLE KLDSNSIVNL DSSLLELLQS DDPSSVDSSI WRPTALNKLL  420
IWKGEISKVL EVTESEIDSL ENELKALNSD SGGSCPHPAT SSSLPVEDKD KSCKEHVTNL  480
ITLPTALQIH SSGDTDVQKM CVDNRDQVEF CGIVNDEDID SPGTATSKFV EPLPLVSSSD  540
MMNQTGCSED WDPIQTTIGE ETCSVPSRCT EKTDPSTCGN SSMLLDKEIV APACGVVDKL  600
SDSIFSANKE FASRASDIFS KLLPKEQYEV DPSGVSVPSS WKNDPLIKEK FAKRKQHLRF  660
MERVVTLKFK AFQHLWKEDM HLLSMRKYRS KCHKNIELSL RATNNGHQKH RSSIRSRFST  720
PAGSLNLVPT TETINFTNKL LSDSQVKLYR NSLKMPALIL DKKEKMATRF VSSNGLVEDP  780
CAVENERALM NPWKPEEKEL FIQKLTIYGK DFRKIASFLD HKTTADCVEF YYKNHKSDCF  840
KKAKKKPDMA KQEKSSANTY LISNEKKWNR EMHAASLDIL GAASAIAAHA ESSTRNRQTY  900
SRRLILGGYK NTNTSHGDDT MVERPCSFDT IGNKRETAAA DVLAGICGSI SSEAVSSCIT  960
SSIDPVESYR EWKCQKVDSV VRRPLTPDVM HNVDDETCSD ESCGEMDPSD WTDEEKSSFI  1020
QAVSSYGKDF AMISRCIRSR SEHQCKVFFS KARKCLGLDL VHPRPGNGTS LGDDANGGGS  1080
DAEDACDLET GSGISSDKSG CNMNEDLPSS VTNMNDDEAD PAESMKLQTS PLRPEENNAM  1140
AEVDHGDGKP LKFLAFGDDT DIMDSGAMGG NVTENGILVA ESLPVGEGIN SDTPNPECMV  1200
GEKLVGQNSF DRFGKELEGG DERTNRGKSG CHIPVSVHDL CGNASDQATD GSCSGLNPEY  1260
LHEVSVELNS VQKPSVISLP LENPLATADT AGQDSAAIEC EKSLDQDRLS STPDLQEGRD  1320
HQCSKSVGED DSSKHLSGFP VYTNVEPSQV IRGYPLQIAT KKETNGDISC GNLSEAKPDR  1380
NINGHYITQD GFLQFGNCTP PCSEVDFPPV PLKVEQPGDS RKAHSWSSSD SDKPSRNGDV  1440
KLFGKILSNP SKSTSSIHEN EEGAHNHQLS NKASNLKFTG HHSADGSSPL LKFDCGSYLG  1500
LENVPRRSYG GFWEGNKVRT GFSSFPDSAI LLAKYPAAFS NFPTSSSQME QQPLQAVVKT  1560
SDGSINGVSI FPGMEINGSN GVVDYPVFSR GRDGGAKVQP FTVDVKQQRQ DMFDIPRRNG  1620
LDAITSLQQQ GRAIVGMNVM GRGGILVGGP CTGVSDPVAA IRMHYAKTEQ YGGQVGSIVG  1680
EEESWRGSKG DIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-159	MYB family protein