PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003810.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 341aa    MW: 37156 Da    PI: 9.8028
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003810.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.93.3e-31272330259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  PCP003810.1 272 ADEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 330
                  69************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MTLELMNFPK MEDQKAIQEA ASQGLQSMEH LIRFLSYQQQ QSNNQSARVD CTDITDHTVS  60
KFKKVISLLN RTGHARFRRG PVQPIQPVHF PTSDPLSSQT LNLASALNLT PTPAPAPVTV  120
PAIVPPTPIE SSFVQSQPHS MTLDFTRPNA FASNPKSAEI EFAKESFSVS SSSSFMSSAI  180
TGDGSVSNGK LGSSIFLAPA PAVSGAKPPL STAPFKKRCH EHDHSDDTSC KFSGSGSASG  240
SGNCHCSKRR KNRVKKTIRV PAISSKIADI PADEYSWRKY GQKPIKGSPY PRGYYKCSTV  300
RGCPARKHVE RAPDDPAMLI VTYEGEHRHA RENVGLVFES T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.11e-120WRKY family protein