PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003774.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 379aa MW: 42335.8 Da PI: 8.7312

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003774.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.4	1e-30	76	129	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ++R+ PCP003774.1 76 SRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMHRS 129 69***************************************************7 PP
2	Myb_DNA-binding	52.5	1.2e-16	77	128	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k++ + m+ kg++ ++ks++q+++ PCP003774.1 77 RLRWTPDLHLRFVHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMHR 128 89***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MKSESTSMEE VSKSSPSTSK REYDHEDDEG EEDEVDEDGL QLSNNGVSSS NSTIDENHEK 60 KGASGSVRQY VRSKTSRLRW TPDLHLRFVH AVERLGGQER ATPKLVLQLM NVKGLSIAHV 120 KSHLQMHRSK KMEDPNQVLT DQAGFFMEGG DNQLYNLTQL SMLQSFKKWP SSGLRYGATD 180 HSSWQGRHYH HQIYGPYRSS RTTGLLDHNT RNIGLYGSVA ERILGSNNNN IMTTSANQLH 240 TNLQSPNPGQ TTWSRHQITR DESYQTVIHR PCQDYHSWSA AIRDHQGQSM QKRKALDTDN 300 SDLDLNLSLK VPPKHGHGFG KGLQCGGDNH QKRLMGCSLS LSLSSSSSSK LGVKKFEGTT 360 GYGDSKHGKN MASTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MKSESTSMEE VSKSSPSTSK REYDHEDDEG EEDEVDEDGL QLSNNGVSSS NSTIDENHEK  60
KGASGSVRQY VRSKTSRLRW TPDLHLRFVH AVERLGGQER ATPKLVLQLM NVKGLSIAHV  120
KSHLQMHRSK KMEDPNQVLT DQAGFFMEGG DNQLYNLTQL SMLQSFKKWP SSGLRYGATD  180
HSSWQGRHYH HQIYGPYRSS RTTGLLDHNT RNIGLYGSVA ERILGSNNNN IMTTSANQLH  240
TNLQSPNPGQ TTWSRHQITR DESYQTVIHR PCQDYHSWSA AIRDHQGQSM QKRKALDTDN  300
SDLDLNLSLK VPPKHGHGFG KGLQCGGDNH QKRLMGCSLS LSLSSSSSSK LGVKKFEGTT  360
GYGDSKHGKN MASTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-44	G2-like family protein