PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 510aa MW: 58128.2 Da PI: 9.607 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++++G g+W++ a++ g++Rt+k+c++rw++yl PCP003676.1 22 RGPWTLEEDSLLIQYIARHGEGRWNLLAKRSGLRRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ PCP003676.1 75 RGNLSPEEQLLILDLHSKMGNK-WSKIAQYLP-GRTDNEIKNYWRT 118 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MSTKTKTLSS SSSGEDDGEL RRGPWTLEED SLLIQYIARH GEGRWNLLAK RSGLRRTGKS 60 CRLRWLNYLK PDVKRGNLSP EEQLLILDLH SKMGNKWSKI AQYLPGRTDN EIKNYWRTRV 120 QKQARHLRID TSSVEFQNMI RCFWMPRLQQ KIGGGTSISS AVLNQNHAIS QPLEDNTFPH 180 FTATISPTPQ NIVQEEINMS ASMYNLDVEK QNIKAEYCTG PYIFPSEPMD MSKTVQFPEC 240 PPFHCGDNNG YDTESFNLQE TVSADSAPNF PGNSAGDCYV AETNWVFSIP AEARALGFSV 300 TQKQKSLRLS ILLESDFAKM YTSRKKISKD NNAEPTEFEE SVAQAVFDLE NTNQELKSDL 360 KDLYINSAIQ VDVSGSKKAV VIHVPYRLRK AYRKIHVRLV RELEKKFSGK DVILIATRRI 420 VRPPKKGSAA QRPRTRTLTA VHEAMLEDVV LPAEIIGKRI RYRLDGSKIM KVFLDPKERN 480 NTEYKLESFS AVYRKLSGKD VVFEYPITEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 2e-70 | MYB family protein |