PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003650.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 874aa MW: 96781.5 Da PI: 7.1026

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003650.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	8e-18	326	425	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l + PCP003650.1 326 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLIM 421 89************************555567778***********99899999999.*******************876.7777777 PP EEE- CS B3 95 kvfr 98 ++++ PCP003650.1 422 GFRK 425 7766 PP

Sequence ? help Back to Top
Protein Sequence Length: 874 aa Download sequence
MERRTCMNTA CGTSTSIEWK RGWALRSGGF ANLCLKCWSA YEQSIYCDVF HSNESGWREC 60 GVCGMRLHCG CIASTLLLDL LDGGGVKCIK CAKDSGPHPI SSDEKPDGLG TPKMSELQSN 120 ITNNQLDGHS VEKLKLVQLG NNKDCNGLMN LLQLRNNDTK GLMLKWKHDE VPPPGGEIGG 180 TCFSNFNQAS NGSAEASTVE AFKANLGINN LYESLPRTNL SMTLGSPLGK ENPFPSAIVD 240 EREHSMTSSP LPPGARSRHL FPKPPKLALS TGLEENSTMV SHARVARPPA EGRGRNQLLP 300 RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG 360 LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI 420 MGFRKASNTV SMQGSMDPHL NALSKHLTTA SGDISWNKTE KQEGRTREGL LMPSLVPERK 480 RTRNIGSKSK RLLIDSQDAL ELKLTWEEAQ DLLRPPPASK PSTVVIEDLE FEEYEVSAVI 540 EIFQEPPVFG KRSIFTVRST GEQEQWVQCD SCSKWRRLPA DALLSSKWIC ADNAWDRSRS 600 LCSIPDELSP RELENFLRMC KESKKRRIVA DPRLTPEHEA SGLDALANAA ILGDSVANPE 660 AASVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT MMINKKKRQS 720 EREAEIAYRS QHTWNPRDEA EVDSTSRLVS SHVDPSDNKA KSANESETKS QSKLAETGKG 780 ILDLNSHPGR EGDLQGGPDH VSMISLVQVA TLPLETYMKH NGITSLISEQ QESSTSHVPP 840 QAANETEEQL DENRCPEQES RGEERPDKSQ DDPL

Sequence ? help Back to Top

Protein Sequence Length: 874 aa Download sequence

MERRTCMNTA CGTSTSIEWK RGWALRSGGF ANLCLKCWSA YEQSIYCDVF HSNESGWREC  60
GVCGMRLHCG CIASTLLLDL LDGGGVKCIK CAKDSGPHPI SSDEKPDGLG TPKMSELQSN  120
ITNNQLDGHS VEKLKLVQLG NNKDCNGLMN LLQLRNNDTK GLMLKWKHDE VPPPGGEIGG  180
TCFSNFNQAS NGSAEASTVE AFKANLGINN LYESLPRTNL SMTLGSPLGK ENPFPSAIVD  240
EREHSMTSSP LPPGARSRHL FPKPPKLALS TGLEENSTMV SHARVARPPA EGRGRNQLLP  300
RYWPRITDQE LQQISGDSNS TIVPLFEKML SASDAGRIGR LVLPKACAEA YFPPISQPEG  360
LPLRIQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI  420
MGFRKASNTV SMQGSMDPHL NALSKHLTTA SGDISWNKTE KQEGRTREGL LMPSLVPERK  480
RTRNIGSKSK RLLIDSQDAL ELKLTWEEAQ DLLRPPPASK PSTVVIEDLE FEEYEVSAVI  540
EIFQEPPVFG KRSIFTVRST GEQEQWVQCD SCSKWRRLPA DALLSSKWIC ADNAWDRSRS  600
LCSIPDELSP RELENFLRMC KESKKRRIVA DPRLTPEHEA SGLDALANAA ILGDSVANPE  660
AASVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT MMINKKKRQS  720
EREAEIAYRS QHTWNPRDEA EVDSTSRLVS SHVDPSDNKA KSANESETKS QSKLAETGKG  780
ILDLNSHPGR EGDLQGGPDH VSMISLVQVA TLPLETYMKH NGITSLISEQ QESSTSHVPP  840
QAANETEEQL DENRCPEQES RGEERPDKSQ DDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein