PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003642.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 338aa    MW: 37689.2 Da    PI: 6.9312
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003642.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.62.2e-22164224259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  dDg++WrKYGqK+++++++pr+Y+rCt++    C+++k+v++ ++ p v+ +tY g+H+++
  PCP003642.1 164 DDGHAWRKYGQKNIHNAKHPRNYFRCTHKhdqVCKATKRVQQVQHHPPVFRTTYYGTHTCR 224
                  8***************************98888*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MEWSWPEGLL SNRGRVMEEL IQGRELASQL SRGFDNRSLV VNGHDGRSAE GIVNKILGSF  60
ANTLLILNGK ESDQEFVSDQ IQGNSRGVGG GGSGVSDGGS SGGGGAYSSS WGANHGHAAA  120
IKPEDYTEEE NSCRSSSTFK DRRGSYTRRK TSHSWTRDTP ALIDDGHAWR KYGQKNIHNA  180
KHPRNYFRCT HKHDQVCKAT KRVQQVQHHP PVFRTTYYGT HTCRDYLKTS EQVLDCTSPR  240
DSSKFISFEN ANCLTNKQEH PFFASFASSS VKEEVFAKED IATIDHSVTS DHNHSLRHDH  300
LVSHDLTFQS SGPMVGFSSS IDQYEDDDVF WKTVESLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-28WRKY family protein