PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 569aa MW: 62090.3 Da PI: 7.3803 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.7e-16 | 75 | 121 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l PCP003389.1 75 KGGWTPQEDETLRNAVAAFNGKSWKKIAEFFP-DRSEVQCLHRWQKVL 121 688*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 62.7 | 7.2e-20 | 127 | 173 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v+++G+ W++Ia+ ++ gR +kqc++rw+++l PCP003389.1 127 KGPWTQEEDDKIIELVAKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 173 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 55.5 | 1.3e-17 | 179 | 222 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + +WT eE++ l +a++++G++ W+ Ia+ ++ gRt++ +k++w++ PCP003389.1 179 KEAWTLEEELALMKAHQMHGNK-WAEIAKVLP-GRTDNAIKNHWNS 222 579*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence |
MSSISIPATS SQAEEEMAGA KLEECCLENK QSMATSSSSV SEGSGSAIIK STGACSPASA 60 SPTQRRTSGP IRRAKGGWTP QEDETLRNAV AAFNGKSWKK IAEFFPDRSE VQCLHRWQKV 120 LNPELVKGPW TQEEDDKIIE LVAKYGPTKW SLIAKSLPGR IGKQCRERWH NHLNPDIKKE 180 AWTLEEELAL MKAHQMHGNK WAEIAKVLPG RTDNAIKNHW NSSLKKKLDS YLTTGTLPPP 240 PKCGAKEPRS NATKKILVCS TKGSDSTAQT SSGNADMSKL DEDGKDQFES AAPPQDMGAS 300 LSVHPNEFAD SEGDNLRLSF MDLSCSNSDS GPKYDNFGVK RKPQIESSVS NGRAESENCG 360 FNNQMDEDKV KTTSFPFETP SYGSLYYEPP PLESSVQFNS GFSSMHRLQN DYTSSPNLSP 420 ISFFTPPCVK GSGLCNQSPE SILKIAAKTF PNTPSILRKR KTIGQGQSPR NKVAIVDCES 480 VREMLNVSSE HKNSAEVSGS QDGSLCESPT SNGISTIGPN GKAFNASPPY RLRARRTAVF 540 KSVEKQLEFT CDEEYDANSM SVELSANGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-161 | MYB family protein |