PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003366.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 525aa MW: 57173.6 Da PI: 7.9773

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003366.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107	9.5e-34	243	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers +++++ei+Y+geHnhe PCP003366.1 243 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSI-EGQITEIIYKGEHNHE 299 8**************************************.*************8 PP
2	WRKY	107.5	6.8e-34	415	473	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++ C+v+k+ver+++dpk+v++tYeg+Hnh+ PCP003366.1 415 LDDGYRWRKYGQKVVKGNPYPRSYYKCTFPACNVRKHVERASTDPKAVITTYEGKHNHD 473 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MADNHEQQSP PPPGPSQPSK PAATHHPPRP TITLPQRTSF ESIFSSAGGG NTGPGLGLGF 60 SPGPMTLVSN FFSDGGDDCK SFSQLLAGAM TSPSPRAPGF QQLEERNSGD GEGSSDFRFK 120 QNRPPSMFSV PTPSGFLDSP GIFSPGQGPF GMTHQQALAQ VTAQAAALSP SFFNFSTEHS 180 TSFSTAPATA LTQPPSSTSD TTPPQEILSG TPDSAVATKE SSDISLSDQR SQPSSFTVDK 240 PNDDGYNWRK YGQKQVKGSE FPRSYYKCTH PNCPVKKKVE RSIEGQITEI IYKGEHNHER 300 PQSKRPLNGN SRANSDLASQ VHGGNSNKPK EGTGPYSMSK KRQESSQATH ENLSGTSDSE 360 EVEDAETRVD EKDEDQPDPK RRNTEVRSEA TAASTHRTVT EPRIIVQTTS EVDLLDDGYR 420 WRKYGQKVVK GNPYPRSYYK CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTS 480 SHYTGNNNAS NLRSTNPGNG KVNQMDLRNR DQQPIASLRL KEQIT

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MADNHEQQSP PPPGPSQPSK PAATHHPPRP TITLPQRTSF ESIFSSAGGG NTGPGLGLGF  60
SPGPMTLVSN FFSDGGDDCK SFSQLLAGAM TSPSPRAPGF QQLEERNSGD GEGSSDFRFK  120
QNRPPSMFSV PTPSGFLDSP GIFSPGQGPF GMTHQQALAQ VTAQAAALSP SFFNFSTEHS  180
TSFSTAPATA LTQPPSSTSD TTPPQEILSG TPDSAVATKE SSDISLSDQR SQPSSFTVDK  240
PNDDGYNWRK YGQKQVKGSE FPRSYYKCTH PNCPVKKKVE RSIEGQITEI IYKGEHNHER  300
PQSKRPLNGN SRANSDLASQ VHGGNSNKPK EGTGPYSMSK KRQESSQATH ENLSGTSDSE  360
EVEDAETRVD EKDEDQPDPK RRNTEVRSEA TAASTHRTVT EPRIIVQTTS EVDLLDDGYR  420
WRKYGQKVVK GNPYPRSYYK CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTS  480
SHYTGNNNAS NLRSTNPGNG KVNQMDLRNR DQQPIASLRL KEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-148	WRKY family protein