PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003323.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 401aa MW: 42854.4 Da PI: 7.2646

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003323.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.4	7.2e-40	64	171	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s++ PCP003323.1 64 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSSMSAPshylrtnasn 161 789******************************************************************99986777777776444444445444333 PP TCP 89 .........k 89 + PCP003323.1 162 yyfnsnnfgA 171 4443333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MIMEADNGIR CRPNFPLQFL DKTNQVDDDP EPAAACSTVA DPGSDPNRTG SSIQEQQPSN 60 KKPPPKRTST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPS 120 VIAATGTGTI PANFTSLNIS LRSSGSSMSA PSHYLRTNAS NYYFNSNNFG AAAPTSQLGT 180 AEHSQRGRIL FPGAGLMSSE SSPPSSMLWN FNNSGNDNIS NNTMLEAKQE LGDHHQAVTL 240 DEASSMARKR IRPEQDLLSA STGSIPASQN TIPATFWMVA NNNPSNSQGS IHHEHINSIN 300 PMWTIPTVGN AGNMYRGPVA GGGHGLHFMN FASPLAILPG QQLGTGSITT TQGAADSHLG 360 MMAALNAYRP ILGGVAMESP ANGQHPHQGA DEGHDRNTNA R

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MIMEADNGIR CRPNFPLQFL DKTNQVDDDP EPAAACSTVA DPGSDPNRTG SSIQEQQPSN  60
KKPPPKRTST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPS  120
VIAATGTGTI PANFTSLNIS LRSSGSSMSA PSHYLRTNAS NYYFNSNNFG AAAPTSQLGT  180
AEHSQRGRIL FPGAGLMSSE SSPPSSMLWN FNNSGNDNIS NNTMLEAKQE LGDHHQAVTL  240
DEASSMARKR IRPEQDLLSA STGSIPASQN TIPATFWMVA NNNPSNSQGS IHHEHINSIN  300
PMWTIPTVGN AGNMYRGPVA GGGHGLHFMN FASPLAILPG QQLGTGSITT TQGAADSHLG  360
MMAALNAYRP ILGGVAMESP ANGQHPHQGA DEGHDRNTNA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	4e-51	TCP family protein