PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003312.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 477aa MW: 53987.7 Da PI: 7.0691

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003312.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.2	4.3e-14	15	59	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W++eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl PCP003312.1 15 TWSQEEDDILRNQISIHGTENWAIIASKFK-DKTTRQCRRRWYTYL 59 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.6e-14	65	108	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + PCP003312.1 65 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 108 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MPQEESKKKE RHIVTWSQEE DDILRNQISI HGTENWAIIA SKFKDKTTRQ CRRRWYTYLN 60 SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC KKRAKYEALA 120 KENAASYINQ NDKRVIIRNG FNTDGTAETT APSKKMRRSH IPSLSEGDRL LEQCGKMSQQ 180 LRAPFAVLIQ NVHNVENLPD QNNVNSTKEV HVNAVQKSKF QGSFLKKDDP KIIALMQQAE 240 LLSSLALKVN AENTDQSLEN AWKVLQDFLN QSKDGDILSY GINDFDFQLE DLKYLLQDLM 300 STTEGSRPSW QQPDLYDESP GSSEYSTGST LLSQTEYYQV EQNKVEIGSL NQEIRPGSQS 360 IPIEGKNGVG DCEKGNFSKK QEIFPSCDEA TKDYAVVSAL SSTEFNSPIK VTPLFRSLAA 420 GIPSPKFSES PFQPKILQMG RVTSFRVPNR CTELAVSLVP ECETNVSIHR QLADIFR

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MPQEESKKKE RHIVTWSQEE DDILRNQISI HGTENWAIIA SKFKDKTTRQ CRRRWYTYLN  60
SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC KKRAKYEALA  120
KENAASYINQ NDKRVIIRNG FNTDGTAETT APSKKMRRSH IPSLSEGDRL LEQCGKMSQQ  180
LRAPFAVLIQ NVHNVENLPD QNNVNSTKEV HVNAVQKSKF QGSFLKKDDP KIIALMQQAE  240
LLSSLALKVN AENTDQSLEN AWKVLQDFLN QSKDGDILSY GINDFDFQLE DLKYLLQDLM  300
STTEGSRPSW QQPDLYDESP GSSEYSTGST LLSQTEYYQV EQNKVEIGSL NQEIRPGSQS  360
IPIEGKNGVG DCEKGNFSKK QEIFPSCDEA TKDYAVVSAL SSTEFNSPIK VTPLFRSLAA  420
GIPSPKFSES PFQPKILQMG RVTSFRVPNR CTELAVSLVP ECETNVSIHR QLADIFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-156	MYB family protein