PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003302.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 1480aa MW: 159843 Da PI: 6.4656

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003302.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91	9.1e-29	272	329	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK kg+++pr+YYrC+ + +Cpv+k+v+rs ed +++++tYeg+Hnh+ PCP003302.1 272 DGCQWRKYGQKIAKGNPCPRAYYRCSVSsSCPVRKQVQRSFEDMSILITTYEGSHNHP 329 9***********************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1480 aa Download sequence
MEMPKRPSKA LMESDNTHEE TSSLGKTVLE DKTVKSDGDH EEGTPMEITK GGHGWHVEPD 60 LEPPSTGKNR ALVNHKQRDE LQSAKAEMVE ATEENERLKL LLYQISKDYQ SLRMHFHGLL 120 QNGGETKKCT DTSSSTALDL THEQNTEEAD DLVSLSLGRT SSSIDQPRKD GRIKKISQLS 180 SSTNGKDDDD DNGMLNGAGL ALELGCKFEP AADQSTNNSS GGPKEDDLAE IWPPSKTLKT 240 TRSRDDEASQ QTHSKKARVS VRVRCDDHTI YDGCQWRKYG QKIAKGNPCP RAYYRCSVSS 300 SCPVRKQVQR SFEDMSILIT TYEGSHNHPL PMSATAMAST TSAAASMLQS RSSASQQGLI 360 NSTTAPISAS TANLQGVNFS STSTLSHNSR LPQKHFYFPN SSISTNNSHP TITLDLTVPS 420 PSHFGIFPSA SGSSFSSNPR YPSTSLNFSS SSDHNNTLQL KSPWNNINHT ASGYFNYGNR 480 INQVGSALNI GKQPIFQEHN KVYQSYSYIQ NQNPSPPLHH PQMLTDSTAT ATKAITSNPK 540 FQSALAAALT SFVGNGSTSS TTGIRESHQS TVTIAESASG LKLKRDAQPQ EQEVKGTSPK 600 ISSYDAYFDT IQSRKKLSRP LQENLTFAFS KVPVSSFQGV PGGKVVEIQA DTSIADAVKT 660 LSNHHILSAP VRNPEADASA DWRESYLGIV DYSAILLWVL ETSAFSPSAH STAAVVGGAG 720 AMGAIGAVAL GVTGPAALAG LTAAAVCSAM AGSAVGKIGA AEDKGEGRDS PTDADKLSEE 780 LDSVILQDEP FKTTTVRSIL KSFRWESFLP VGTDSSMLTV LLLLSKYRMR NVPVIEVGQP 840 DIKNFITQSA VVQGLEGCKG MEWFDCIAAK SISDLGLPFM SSNEVISTNV DDPVLEAFKK 900 MRENQIGGLP VVQGPKKKIV GNVSISDIRF SLLKAELFNN FRNLSVRDFM NTISESQGRQ 960 ILPITCNLQS TLGDVIETLA SKSVHRVYVV DDEGEVVGVI TLRDVISCFI FEPPNHFDVY 1020 LGFAKKQIMK QVDMAQAEAE AQEVKERSKL SSYDAYFETI QSRKKLPRPL QEVLTNTFAK 1080 IPVSSFPAVP GGKVIEIPAD TSVGDAVKIL SENNILSAPV SNPEADTSSD WRGRYLGLID 1140 YSAIILWVLE SAELAAVAIS ATSATAAGVG AGAVGAIGAL ALGVTGPAAV AGLTAAAVGA 1200 AVAGGAAAEK GIAKDAPTAA DELGKDFYNV ILNDEPFKST TVRSILKSFR WAPFIPVATD 1260 SSMLSVMLLL SKYRLRNVPV IEPGQPNIKN YITQSALVQG LERCRGRDWF DCIASKPISD 1320 FGLPFMSSEE VISITSNDLI LEAFKRMRDN KIGGLPVVEG PKKNIVGNVS IRDIRYLLLK 1380 PELFSNFRKL TVRDFMSTIA TTNEIGKVIQ PITCKLESPL GNVIESLASK SVHRIHVVAG 1440 EEGEVVGVIT LRDVISCFIY EPPDHFNNYM GFAVKEMLNQ

Sequence ? help Back to Top

Protein Sequence Length: 1480 aa Download sequence

MEMPKRPSKA LMESDNTHEE TSSLGKTVLE DKTVKSDGDH EEGTPMEITK GGHGWHVEPD  60
LEPPSTGKNR ALVNHKQRDE LQSAKAEMVE ATEENERLKL LLYQISKDYQ SLRMHFHGLL  120
QNGGETKKCT DTSSSTALDL THEQNTEEAD DLVSLSLGRT SSSIDQPRKD GRIKKISQLS  180
SSTNGKDDDD DNGMLNGAGL ALELGCKFEP AADQSTNNSS GGPKEDDLAE IWPPSKTLKT  240
TRSRDDEASQ QTHSKKARVS VRVRCDDHTI YDGCQWRKYG QKIAKGNPCP RAYYRCSVSS  300
SCPVRKQVQR SFEDMSILIT TYEGSHNHPL PMSATAMAST TSAAASMLQS RSSASQQGLI  360
NSTTAPISAS TANLQGVNFS STSTLSHNSR LPQKHFYFPN SSISTNNSHP TITLDLTVPS  420
PSHFGIFPSA SGSSFSSNPR YPSTSLNFSS SSDHNNTLQL KSPWNNINHT ASGYFNYGNR  480
INQVGSALNI GKQPIFQEHN KVYQSYSYIQ NQNPSPPLHH PQMLTDSTAT ATKAITSNPK  540
FQSALAAALT SFVGNGSTSS TTGIRESHQS TVTIAESASG LKLKRDAQPQ EQEVKGTSPK  600
ISSYDAYFDT IQSRKKLSRP LQENLTFAFS KVPVSSFQGV PGGKVVEIQA DTSIADAVKT  660
LSNHHILSAP VRNPEADASA DWRESYLGIV DYSAILLWVL ETSAFSPSAH STAAVVGGAG  720
AMGAIGAVAL GVTGPAALAG LTAAAVCSAM AGSAVGKIGA AEDKGEGRDS PTDADKLSEE  780
LDSVILQDEP FKTTTVRSIL KSFRWESFLP VGTDSSMLTV LLLLSKYRMR NVPVIEVGQP  840
DIKNFITQSA VVQGLEGCKG MEWFDCIAAK SISDLGLPFM SSNEVISTNV DDPVLEAFKK  900
MRENQIGGLP VVQGPKKKIV GNVSISDIRF SLLKAELFNN FRNLSVRDFM NTISESQGRQ  960
ILPITCNLQS TLGDVIETLA SKSVHRVYVV DDEGEVVGVI TLRDVISCFI FEPPNHFDVY  1020
LGFAKKQIMK QVDMAQAEAE AQEVKERSKL SSYDAYFETI QSRKKLPRPL QEVLTNTFAK  1080
IPVSSFPAVP GGKVIEIPAD TSVGDAVKIL SENNILSAPV SNPEADTSSD WRGRYLGLID  1140
YSAIILWVLE SAELAAVAIS ATSATAAGVG AGAVGAIGAL ALGVTGPAAV AGLTAAAVGA  1200
AVAGGAAAEK GIAKDAPTAA DELGKDFYNV ILNDEPFKST TVRSILKSFR WAPFIPVATD  1260
SSMLSVMLLL SKYRLRNVPV IEPGQPNIKN YITQSALVQG LERCRGRDWF DCIASKPISD  1320
FGLPFMSSEE VISITSNDLI LEAFKRMRDN KIGGLPVVEG PKKNIVGNVS IRDIRYLLLK  1380
PELFSNFRKL TVRDFMSTIA TTNEIGKVIQ PITCKLESPL GNVIESLASK SVHRIHVVAG  1440
EEGEVVGVIT LRDVISCFIY EPPDHFNNYM GFAVKEMLNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-57	WRKY family protein